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3lv4
From Proteopedia
(Difference between revisions)
(New page: '''Unreleased structure''' The entry 3lv4 is ON HOLD Authors: Vorobiev, S., Abashidze, M., Seetharaman, J., Belote, RL., Ciccosanti, C., Sahdev, S., Xiao, R., Acton, T.B., Everett, J.K....) |
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| - | '''Unreleased structure''' | ||
| - | + | ==Crystal structure of the glycoside hydrolase, family 43 YxiA protein from Bacillus licheniformis. Northeast Structural Genomics Consortium Target BiR14.== | |
| - | + | <StructureSection load='3lv4' size='340' side='right' caption='[[3lv4]], [[Resolution|resolution]] 1.69Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | + | <table><tr><td colspan='2'>[[3lv4]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Bacld Bacld]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3LV4 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3LV4 FirstGlance]. <br> | |
| - | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene></td></tr> | |
| - | + | <tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> | |
| - | + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">BL00219, BLi04220, yxiA ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=279010 BACLD])</td></tr> | |
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3lv4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3lv4 OCA], [http://pdbe.org/3lv4 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3lv4 RCSB], [http://www.ebi.ac.uk/pdbsum/3lv4 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3lv4 ProSAT]</span></td></tr> | ||
| + | </table> | ||
| + | == Evolutionary Conservation == | ||
| + | [[Image:Consurf_key_small.gif|200px|right]] | ||
| + | Check<jmol> | ||
| + | <jmolCheckbox> | ||
| + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/lv/3lv4_consurf.spt"</scriptWhenChecked> | ||
| + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3lv4 ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
| + | [[Category: Bacld]] | ||
| + | [[Category: Abashidze, M]] | ||
| + | [[Category: Acton, T B]] | ||
| + | [[Category: Belote, R L]] | ||
| + | [[Category: Ciccosanti, C]] | ||
| + | [[Category: Everett, J K]] | ||
| + | [[Category: Hunt, J F]] | ||
| + | [[Category: Montelione, G T]] | ||
| + | [[Category: Structural genomic]] | ||
| + | [[Category: Sahdev, S]] | ||
| + | [[Category: Seetharaman, J]] | ||
| + | [[Category: Tong, L]] | ||
| + | [[Category: Vorobiev, S]] | ||
| + | [[Category: Xiao, R]] | ||
| + | [[Category: 5-alpha-l-arabinosidase]] | ||
| + | [[Category: Glycoside hydrolase]] | ||
| + | [[Category: Hydrolase]] | ||
| + | [[Category: Nesg]] | ||
| + | [[Category: PSI, Protein structure initiative]] | ||
| + | [[Category: Similar to arabinan endo-1]] | ||
Current revision
Crystal structure of the glycoside hydrolase, family 43 YxiA protein from Bacillus licheniformis. Northeast Structural Genomics Consortium Target BiR14.
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Categories: Bacld | Abashidze, M | Acton, T B | Belote, R L | Ciccosanti, C | Everett, J K | Hunt, J F | Montelione, G T | Structural genomic | Sahdev, S | Seetharaman, J | Tong, L | Vorobiev, S | Xiao, R | 5-alpha-l-arabinosidase | Glycoside hydrolase | Hydrolase | Nesg | PSI, Protein structure initiative | Similar to arabinan endo-1
