This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


6amk

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "6amk" [edit=sysop:move=sysop])
Current revision (06:53, 4 April 2018) (edit) (undo)
 
(One intermediate revision not shown.)
Line 1: Line 1:
-
'''Unreleased structure'''
 
-
The entry 6amk is ON HOLD until Paper Publication
+
==Structure of Streptomyces venezuelae BldC-whiI opt complex==
 +
<StructureSection load='6amk' size='340' side='right' caption='[[6amk]], [[Resolution|resolution]] 3.29&Aring;' scene=''>
 +
== Structural highlights ==
 +
<table><tr><td colspan='2'>[[6amk]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/As_4.1526 As 4.1526]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6AMK OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6AMK FirstGlance]. <br>
 +
</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
 +
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[6ama|6ama]]</td></tr>
 +
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">AQF52_4259 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=54571 AS 4.1526])</td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6amk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6amk OCA], [http://pdbe.org/6amk PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6amk RCSB], [http://www.ebi.ac.uk/pdbsum/6amk PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6amk ProSAT]</span></td></tr>
 +
</table>
 +
<div style="background-color:#fffaf0;">
 +
== Publication Abstract from PubMed ==
 +
Streptomycetes are notable for their complex life cycle and production of most clinically important antibiotics. A key factor that controls entry into development and the onset of antibiotic production is the 68-residue protein, BldC. BldC is a putative DNA-binding protein related to MerR regulators, but lacks coiled-coil dimerization and effector-binding domains characteristic of classical MerR proteins. Hence, the molecular function of the protein has been unclear. Here we show that BldC is indeed a DNA-binding protein and controls a regulon that includes other key developmental regulators. Intriguingly, BldC DNA-binding sites vary significantly in length. Our BldC-DNA structures explain this DNA-binding capability by revealing that BldC utilizes a DNA-binding mode distinct from MerR and other known regulators, involving asymmetric head-to-tail oligomerization on DNA direct repeats that results in dramatic DNA distortion. Notably, BldC-like proteins radiate throughout eubacteria, establishing BldC as the founding member of a new structural family of regulators.
-
Authors: Schumacher, M.A.
+
The MerR-like protein BldC binds DNA direct repeats as cooperative multimers to regulate Streptomyces development.,Schumacher MA, den Hengst CD, Bush MJ, Le TBK, Tran NT, Chandra G, Zeng W, Travis B, Brennan RG, Buttner MJ Nat Commun. 2018 Mar 19;9(1):1139. doi: 10.1038/s41467-018-03576-3. PMID:29556010<ref>PMID:29556010</ref>
-
Description: Structure of S. coelicolor BldC-whiI opt complex
+
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
-
[[Category: Unreleased Structures]]
+
</div>
-
[[Category: Schumacher, M.A]]
+
<div class="pdbe-citations 6amk" style="background-color:#fffaf0;"></div>
 +
== References ==
 +
<references/>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: As 4 1526]]
 +
[[Category: Schumacher, M A]]
 +
[[Category: Bldc]]
 +
[[Category: Dna binding protein]]
 +
[[Category: Dna binding protein-dna complex]]
 +
[[Category: Merr-like]]
 +
[[Category: Streptomyce]]

Current revision

Structure of Streptomyces venezuelae BldC-whiI opt complex

6amk, resolution 3.29Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools