This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
6fky
From Proteopedia
(Difference between revisions)
| Line 3: | Line 3: | ||
<StructureSection load='6fky' size='340' side='right' caption='[[6fky]], [[Resolution|resolution]] 2.98Å' scene=''> | <StructureSection load='6fky' size='340' side='right' caption='[[6fky]], [[Resolution|resolution]] 2.98Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[6fky]] is a 4 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6FKY OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6FKY FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[6fky]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Brachidanio_rerio Brachidanio rerio]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6FKY OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6FKY FirstGlance]. <br> |
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=DZK:(2~{S})-2-(phenylmethylsulfanyl)butanedioic+acid'>DZK</scene>, <scene name='pdbligand=E9N:(2~{R})-2-(phenylmethylsulfanyl)butanedioic+acid'>E9N</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=EPE:4-(2-HYDROXYETHYL)-1-PIPERAZINE+ETHANESULFONIC+ACID'>EPE</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr> | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=DZK:(2~{S})-2-(phenylmethylsulfanyl)butanedioic+acid'>DZK</scene>, <scene name='pdbligand=E9N:(2~{R})-2-(phenylmethylsulfanyl)butanedioic+acid'>E9N</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=EPE:4-(2-HYDROXYETHYL)-1-PIPERAZINE+ETHANESULFONIC+ACID'>EPE</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr> | ||
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=GZB:'>GZB</scene></td></tr> | <tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=GZB:'>GZB</scene></td></tr> | ||
| + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">sirt5, si:ch211-121a2.1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=7955 Brachidanio rerio])</td></tr> | ||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6fky FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6fky OCA], [http://pdbe.org/6fky PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6fky RCSB], [http://www.ebi.ac.uk/pdbsum/6fky PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6fky ProSAT]</span></td></tr> | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6fky FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6fky OCA], [http://pdbe.org/6fky PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6fky RCSB], [http://www.ebi.ac.uk/pdbsum/6fky PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6fky ProSAT]</span></td></tr> | ||
</table> | </table> | ||
| Line 23: | Line 24: | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| + | [[Category: Brachidanio rerio]] | ||
[[Category: Pannek, M]] | [[Category: Pannek, M]] | ||
[[Category: Steegborn, C]] | [[Category: Steegborn, C]] | ||
Current revision
Crystal structure of zebrafish Sirtuin 5 in complex with 3-(benzylthio)succinyl-CPS1 peptide
| |||||||||||
