User:Alisa Cario
From Proteopedia
(Difference between revisions)
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- | * Full Real Name: Alisa Cario | + | <scene name='77/778894/Thing/1'>Text To Be Displayed</scene>* Full Real Name: Alisa Cario |
* Position: Graduate Student | * Position: Graduate Student | ||
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== '''Introduction and Background''' == | == '''Introduction and Background''' == | ||
- | The cytoskeleton brings structure to the cell, is integral in cell division, and aids in migration. One of the constitutive parts of the cytoskeleton are microtubules. Microtubules are polymerized from tubulin subunits that incorporate into a hollow cylindrical structure linked together by lateral and vertical hydrogen bonds | + | The cytoskeleton brings structure to the cell, is integral in cell division, and aids in migration. One of the constitutive parts of the cytoskeleton are microtubules. Microtubules are polymerized from tubulin subunits that incorporate into a hollow cylindrical structure linked together by lateral and vertical hydrogen bonds. Each tubulin subunit is made from a heterodimer of alpha and beta tubulin. Both alpha and beta tubulin are known to bind to GTP. However, only the beta subunit hydrolyzes GTP, which occurs once incorporated into microtubules. The beta tubulin hydrolysis of GTP to GDP is known to destabilize microtubules. Microtubules have polarity where one end of microtubule, called the plus end, has a greater affinity to add tubulin subunits than the other end, called the minus end. Microtubules are inherently dynamic, going through periods of depolymerization, known as catastrophe, and then return to polymerization, known as rescue. Microtubules can also go through a process called tread milling, where the length of the microtubule does not change but the rate of polymerization at the plus end equals the rate of depolymerization at the minus end. There are a number of microtubule associated proteins (MAPs) that are known to regulate the dynamics of microtubules. Some examples of this are KIF family kinesin motors, tau, MAP2 and stathmin. |
[[Image:Stathmin_figure_cario1.png|center|thumb| upright=3| Figure XXX. Stathmin in purple can bind to tubulin dimers to prevent polymerization or to microtubules to increase catastrophe ]] | [[Image:Stathmin_figure_cario1.png|center|thumb| upright=3| Figure XXX. Stathmin in purple can bind to tubulin dimers to prevent polymerization or to microtubules to increase catastrophe ]] | ||
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== '''Function''' == | == '''Function''' == | ||
- | Stathmin, also known as oncoprotein 18 or metablastin, is a 19kDa microtubule associated protein known to destabilize microtubules | + | Stathmin, also known as oncoprotein 18 or metablastin, is a 19kDa microtubule associated protein known to destabilize microtubules ( ). Stathmin is a cell cycle and developmentally regulated protein, known to play a role in proliferation, differentiation, and function of cells. ( ) Stathmin can bind to tubulin dimers to inhibit polymerization or it can bind to the microtubule to enhance the rate of catastrophe. This is shown in Figure XXX. <span style="color:purple">Stathmin</span>, shown in purple, can bind to <span style="color:green">tubulin heterodimers or microtubules </span>, shown in green. |
- | [[Image:stathmin_structure2.png|center |thumb| upright=3| Figure XXX. Stathmin in purple can bind to tubulin dimers to prevent polymerization or to microtubules to increase catastrophe ]] | + | [[Image:stathmin_structure2.png|center |thumb| upright=3| Figure XXX. ''Adapted from Ruben (2004) '' Stathmin in purple can bind to tubulin dimers to prevent polymerization or to microtubules to increase catastrophe ]] |
- | '''Mitosis''' Stathmin's role in the cell cycle progression is well characterized. During interphase, microtubules are relatively stable. However during the onset of mitosis, stathmin is upregulated to increase the rate of catastrophe of microtubules, causing them to become more dynamic (1). Stathmin has also been shown to bind and sequester two tubulin heterodimers, reducing the amount of available tubulin to polymerize microtubules (2). However, as mitosis progresses, microtubules must repolymerize to form the mitotic spindle. Stathmin is regulated during this process by phosphorylation ( ). There are four known phosphorylation sites of stathmin, serine 16, serine 25, serine 38, and serine 63. Stathmin is the known target of cyclin-dependent kinases ( ). Stathmin overexpression prevents mitotic spindle formation where inhibition interferes with later stages in mitosis. | + | '''Mitosis''' |
+ | |||
+ | Stathmin's role in the cell cycle progression is well characterized. During interphase, microtubules are relatively stable. However during the onset of mitosis, stathmin is upregulated to increase the rate of catastrophe of microtubules, causing them to become more dynamic (1). Stathmin has also been shown to bind and sequester two tubulin heterodimers, reducing the amount of available tubulin to polymerize microtubules (2). However, as mitosis progresses, microtubules must repolymerize to form the mitotic spindle. Stathmin is regulated during this process by phosphorylation ( ). There are four known phosphorylation sites of stathmin, serine 16, serine 25, serine 38, and serine 63. Stathmin is the known target of cyclin-dependent kinases ( ). Stathmin overexpression prevents mitotic spindle formation where inhibition interferes with later stages in mitosis ( ). | ||
[[Image:Stathmin_phosphorylation.png|center|thumb| upright=3| Figure XXX. ]] | [[Image:Stathmin_phosphorylation.png|center|thumb| upright=3| Figure XXX. ]] | ||
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'''Migration''' | '''Migration''' | ||
- | The cytoskeleton is a vital part of cell migration. The leading edge is driven by actin polymerization. However, microtubules are needed to retract from the trailing edge to move the cell forward. Stathmin is thought to have a | + | The cytoskeleton is a vital part of cell migration. The leading edge is driven by actin polymerization ( ). However, microtubules are needed to retract from the trailing edge to move the cell forward. Stathmin is thought to have a role in migration, allowing to microtubules to depolymerize to aid in movement. Stathmin has been show to be a part of the integrin alpha5 beta1/FAK/ ERK pathway ( ). |
'''Differentiation''' | '''Differentiation''' | ||
- | Stathmin expression is regulated during stages of development. It is regulated in early and late embryogenesis. It is also regulated in differentiating muscle cells, T lymphocytes, and oligodendryocytes. | + | Stathmin expression is regulated during stages of development. It is regulated in early and late embryogenesis. ( ) . It is also regulated in differentiating muscle cells, T lymphocytes, and oligodendryocytes (. ). |
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====How does the structure relate to it's function?==== | ====How does the structure relate to it's function?==== | ||
- | Stathmin is not | + | Stathmin is not a structurally complicated the protein, consisting of a coiled coil alpha helix, that binds across two tubulin heterodimers, and a mostly disordered N-terminal region that also has some beta strand properties. These different regions of the protein are known to have different functions. |
- | The N-terminal region is known to increase tubulin catastrophe. This region helps destabilize the ends of the microtubule filaments by curving the tubulin dimers at the end, and disrupting lateral hydrogen bonds. The N-terminal region is known as the regulatory domain of the protein, because it is subject to most of the post-translational modifications. This region binds and caps alpha tubulin to accomplish this task. ( ) 4. | + | The N-terminal region is known to increase tubulin catastrophe. This region helps destabilize the ends of the microtubule filaments by curving the tubulin dimers at the end, and disrupting lateral hydrogen bonds. The N-terminal region is known as the regulatory domain of the protein, because it is subject to most of the post-translational modifications, as shown in Figure XXX. This region binds and caps alpha tubulin to accomplish this task. ( ) 4. |
- | The C-terminal region, also known as the interaction domain, is known to sequester tubulin heterodimers. This region is comprised of a coiled-coil | + | The C-terminal region, also known as the interaction domain, is known to sequester tubulin heterodimers. This region is comprised of a coiled-coil alpha helix. This region of stathmin is known to bind to helix 10 of alpha tubulin. Helix 10 of alpha tubulin is thought to be important for incorporation into microtubules ( ) . |
- | The structure of stathmin, in 4eb6, is | + | The structure of stathmin, in 4eb6, is bound to two tubulin heterodimers. The tubulin dimers are bound to outside ligands. Vinblastine is a chemotherapeutic that binds to tubulin to prevent microtubule polymerization ( ) and can be seen in the structure ____. The beta subunits of tubulin are bound to GDP and each of the alpha subunits are bound to GTP and a Magnesium ion. There are also two mutations to the stathmin in this structure. The mutations are A11C and W17F. |
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[[Image:Stathmin_mutations.png|center|thumb| upright=3| Figure XXX. ]] | [[Image:Stathmin_mutations.png|center|thumb| upright=3| Figure XXX. ]] | ||
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'''Multiple Schlerosis''' | '''Multiple Schlerosis''' | ||
- | Brain tissue samples from people suffering from multiple schlerosis found that stathmin is unregulated in oligodendrocytes. The up-regulation of stathmin showed instability in oligodendrocyte microtubules leading to a more globular morphology of the cells. Oligodendrocyte ability to myelinate axons in the central nervous system was greatly reduced (REFERENCE). | + | Brain tissue samples from people suffering from multiple schlerosis found that stathmin is unregulated later in the lineage of oligodendrocytes. The up-regulation of stathmin showed instability in oligodendrocyte microtubules leading to a more globular morphology of the cells. Oligodendrocyte ability to myelinate axons in the central nervous system was greatly reduced (REFERENCE). |
- | '''Cancer''' Due to stathmin's role in mitosis and cell migration, it is not surprising that is has been implicated in many cancers and is an active target of cancer therapeutics. Overexpression of stathmin has been shown to increase metastasis, worse prognosis, and increased chemoresistance. Stathmin levels are known to be increasesd in a number of cancers | + | '''Cancer''' Due to stathmin's role in mitosis and cell migration, it is not surprising that is has been implicated in many cancers and is an active target of cancer therapeutics. Overexpression of stathmin has been shown to increase metastasis, worse prognosis, and increased chemoresistance ( ). Stathmin levels are known to be increasesd in a number of cancers. Stathmin was seen to be upregulated in breast cancer tissue comparative with normal breast tissue ( ). Another study was done to show stathmin upregulation in esophageal squamous cell carcinomas ( ). Studies using a non-phosphorylatable stathmin mutant shows that cells arrest during mitosis (Marklund, Larson) |
== '''Evolutionary conservation''' == | == '''Evolutionary conservation''' == | ||
- | Stathmin belongs to a gene family. This family includes SCG10 and SCILP, which are neuronal proteins. Other members of this family of proteins include XB3, which was discovered in Xenopus (34 from https://onlinelibrary.wiley.com/doi/pdf/10.1111/j.1432-1033.1997.t01-2-00794.x) | + | Stathmin belongs to a gene family that have a characteristic stathmin like domain. This family includes SCG10 and SCILP, which are neuronal proteins. Other members of this family of proteins include XB3, which was discovered in Xenopus (34 from https://onlinelibrary.wiley.com/doi/pdf/10.1111/j.1432-1033.1997.t01-2-00794.x) |
'''Isoforms''' | '''Isoforms''' |
Revision as of 21:14, 26 April 2018
* Full Real Name: Alisa Cario
- Position: Graduate Student
- Institution (NO ABBREVIATIONS): University of Vermont
- City, State/Province, Country: Burlington, VT USA
- Field of Expertise or Study: Creation of protopedia page for a class project. The class is Proteins 1 under Dr. Stephen Everse
Stathmin-4 bound to Tubulin stabilized with Vinblastin
4eb6
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