This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
2ki6
From Proteopedia
| Line 1: | Line 1: | ||
| + | {{Large structure}} | ||
==The FGF1-S100A13-C2A hetero-hexameric complex structure: A component in the non-classical pathway for FGF1 secretion== | ==The FGF1-S100A13-C2A hetero-hexameric complex structure: A component in the non-classical pathway for FGF1 secretion== | ||
<StructureSection load='2ki6' size='340' side='right' caption='[[2ki6]], [[NMR_Ensembles_of_Models | 18 NMR models]]' scene=''> | <StructureSection load='2ki6' size='340' side='right' caption='[[2ki6]], [[NMR_Ensembles_of_Models | 18 NMR models]]' scene=''> | ||
| Line 5: | Line 6: | ||
</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=DLY:D-LYSINE'>DLY</scene></td></tr> | </td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=DLY:D-LYSINE'>DLY</scene></td></tr> | ||
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">SYT1, SVP65, SYT ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN]), FGF1, FGFA ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN]), S100A13 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN])</td></tr> | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">SYT1, SVP65, SYT ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN]), FGF1, FGFA ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN]), S100A13 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN])</td></tr> | ||
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2ki6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ki6 OCA], [http://pdbe.org/2ki6 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2ki6 RCSB], [http://www.ebi.ac.uk/pdbsum/2ki6 PDBsum]</span></td></tr> | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2ki6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ki6 OCA], [http://pdbe.org/2ki6 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2ki6 RCSB], [http://www.ebi.ac.uk/pdbsum/2ki6 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2ki6 ProSAT]</span></td></tr> |
</table> | </table> | ||
{{Large structure}} | {{Large structure}} | ||
| Line 14: | Line 15: | ||
Check<jmol> | Check<jmol> | ||
<jmolCheckbox> | <jmolCheckbox> | ||
| - | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ki/2ki6_consurf.spt"</scriptWhenChecked> | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ki/2ki6_consurf.spt"</scriptWhenChecked> |
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
</jmolCheckbox> | </jmolCheckbox> | ||
| - | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/ | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2ki6 ConSurf]. |
<div style="clear:both"></div> | <div style="clear:both"></div> | ||
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
| Line 41: | Line 42: | ||
[[Category: Rani, S G]] | [[Category: Rani, S G]] | ||
[[Category: Yu, C]] | [[Category: Yu, C]] | ||
| + | [[Category: Acetylation]] | ||
| + | [[Category: Alternative splicing]] | ||
[[Category: Angiogenesis]] | [[Category: Angiogenesis]] | ||
[[Category: C2a]] | [[Category: C2a]] | ||
| + | [[Category: Calcium]] | ||
[[Category: Cell junction]] | [[Category: Cell junction]] | ||
[[Category: Cytoplasmic vesicle]] | [[Category: Cytoplasmic vesicle]] | ||
| Line 58: | Line 62: | ||
[[Category: Palmitate]] | [[Category: Palmitate]] | ||
[[Category: Phosphoprotein]] | [[Category: Phosphoprotein]] | ||
| + | [[Category: Polymorphism]] | ||
[[Category: Protein transport]] | [[Category: Protein transport]] | ||
[[Category: S100a13]] | [[Category: S100a13]] | ||
[[Category: Synapse]] | [[Category: Synapse]] | ||
[[Category: Transmembrane]] | [[Category: Transmembrane]] | ||
Revision as of 10:38, 18 July 2018
The FGF1-S100A13-C2A hetero-hexameric complex structure: A component in the non-classical pathway for FGF1 secretion
| |||||||||||
Categories: Human | Krishna, S M | Rani, S G | Yu, C | Acetylation | Alternative splicing | Angiogenesis | C2a | Calcium | Cell junction | Cytoplasmic vesicle | Developmental protein | Differentiation | Fgf1 | Fgf1-s100a13-c2a hetero-hexameric complex | Glycoprotein | Growth factor | Heparin-binding | Lipoprotein | Membrane | Metal-binding | Mitogen | Palmitate | Phosphoprotein | Polymorphism | Protein transport | S100a13 | Synapse | Transmembrane

