This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
2zdg
From Proteopedia
(Difference between revisions)
| Line 1: | Line 1: | ||
| + | |||
==Crystal structure of D-Alanine:D-Alanine Ligase with ADP from Thermus thermophius HB8== | ==Crystal structure of D-Alanine:D-Alanine Ligase with ADP from Thermus thermophius HB8== | ||
<StructureSection load='2zdg' size='340' side='right' caption='[[2zdg]], [[Resolution|resolution]] 2.20Å' scene=''> | <StructureSection load='2zdg' size='340' side='right' caption='[[2zdg]], [[Resolution|resolution]] 2.20Å' scene=''> | ||
| Line 6: | Line 7: | ||
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[2yzg|2yzg]], [[2yzm|2yzm]]</td></tr> | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[2yzg|2yzg]], [[2yzm|2yzm]]</td></tr> | ||
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/D-alanine--D-alanine_ligase D-alanine--D-alanine ligase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=6.3.2.4 6.3.2.4] </span></td></tr> | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/D-alanine--D-alanine_ligase D-alanine--D-alanine ligase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=6.3.2.4 6.3.2.4] </span></td></tr> | ||
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2zdg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2zdg OCA], [http://pdbe.org/2zdg PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2zdg RCSB], [http://www.ebi.ac.uk/pdbsum/2zdg PDBsum], [http://www.topsan.org/Proteins/RSGI/2zdg TOPSAN]</span></td></tr> | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2zdg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2zdg OCA], [http://pdbe.org/2zdg PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2zdg RCSB], [http://www.ebi.ac.uk/pdbsum/2zdg PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2zdg ProSAT], [http://www.topsan.org/Proteins/RSGI/2zdg TOPSAN]</span></td></tr> |
</table> | </table> | ||
== Function == | == Function == | ||
| Line 14: | Line 15: | ||
Check<jmol> | Check<jmol> | ||
<jmolCheckbox> | <jmolCheckbox> | ||
| - | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/zd/2zdg_consurf.spt"</scriptWhenChecked> | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/zd/2zdg_consurf.spt"</scriptWhenChecked> |
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
Revision as of 07:19, 18 October 2018
Crystal structure of D-Alanine:D-Alanine Ligase with ADP from Thermus thermophius HB8
| |||||||||||
Categories: D-alanine--D-alanine ligase | Thermus thermophilus | Kitamura, Y | Kuramitsu, S | Structural genomic | Yokoyama, S | Cell shape | Cell wall biogenesis/degradation | D-alanine-d-alanine ligase | Ligase | National project on protein structural and functional analyse | Nppsfa | Peptidoglycan biosynthesis | Peptidoglycan synthesis | Rsgi
