Tyrosine kinase

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Line 53: Line 53:
**[[3uf4]] – mTK Fyn SH3-SH2 domain – mouse<br />
**[[3uf4]] – mTK Fyn SH3-SH2 domain – mouse<br />
**[[1zbj]] - hTK Fyn SH3 domain – NMR<br />
**[[1zbj]] - hTK Fyn SH3 domain – NMR<br />
 +
**[[3uf4]] - mTK Fyn SH2+SH3 domains<br />
**[[1g83]] - hTK Fyn SH2+SH3 domains (mutant)<br />
**[[1g83]] - hTK Fyn SH2+SH3 domains (mutant)<br />
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**[[1fyn]], [[4znx]] - hTK Fyn SH3 domain + peptide<br />
**[[1fyn]], [[4znx]] - hTK Fyn SH3 domain + peptide<br />
-
**[[1nyf]], [[1nyg]] - hTK Fyn SH3 domain + peptide – NMR<br />
+
**[[1nyf]], [[1nyg]], [[1a0n]], [[1azg]] - hTK Fyn SH3 domain + peptide – NMR<br />
**[[1efn]], [[1avz]] - hTK Fyn SH3 domain + HIV Nef protein<br />
**[[1efn]], [[1avz]] - hTK Fyn SH3 domain + HIV Nef protein<br />
 +
**[[4d8d]] - hTK Fyn SH3 domain (mutant) + HIV Nef protein<br />
**[[1m27]] - hTK Fyn SH3 domain + SH2 domain protein 1A + SLAM peptide<br />
**[[1m27]] - hTK Fyn SH3 domain + SH2 domain protein 1A + SLAM peptide<br />
**[[4d8d]] - hTK Fyn SH3 domain (mutant) + HIV Nef protein<br />
**[[4d8d]] - hTK Fyn SH3 domain (mutant) + HIV Nef protein<br />
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**[[3ue4]], [[3cs9]], [[2hzi]], [[2hz4]], [[2hz0]], [[2hyy]], [[2gqg]], [[4wa9]] - hTK kinase domain + cancer drug<br />
**[[3ue4]], [[3cs9]], [[2hzi]], [[2hz4]], [[2hz0]], [[2hyy]], [[2gqg]], [[4wa9]] - hTK kinase domain + cancer drug<br />
**[[2f4j]], [[4twp]] - hTK kinase domain (mutant) + cancer drug<br />
**[[2f4j]], [[4twp]] - hTK kinase domain (mutant) + cancer drug<br />
-
**[[3qrk]], [[3qri]], [[3qrj]], [[2v7a]], [[2e2b]], [[2hiw]], [[4zog]], [[5hu9]], [[4yc8]] - hTK kinase domain + inhibitor<br />
+
**[[3qrk]], [[3qri]], [[3qrj]], [[2v7a]], [[2e2b]], [[2hiw]], [[4zog]], [[5hu9]], [[4yc8]], [[3pyy]] - hTK kinase domain + inhibitor<br />
**[[1fpu]], [[1m52]], [[2qoh]], [[3kf4]], [[3kfa]] - mTK kinase domain + inhibitor<br />
**[[1fpu]], [[1m52]], [[2qoh]], [[3kf4]], [[3kfa]] - mTK kinase domain + inhibitor<br />
**[[2z60]], [[3dk3]], [[3dk6]], [[3dk7]] - mTK kinase domain (mutant) + inhibitor<br />
**[[2z60]], [[3dk3]], [[3dk6]], [[3dk7]] - mTK kinase domain (mutant) + inhibitor<br />
-
**[[1iep]], [[2hzn]], [[3k5v]], [[3ms9]], [[3mss]], [[3oxz]], [[6hd6]] - mTK kinase domain + cancer drug<br />
+
**[[1iep]], [[2hzn]], [[3k5v]], [[3ms9]], [[3mss]], [[3oxz]] - mTK kinase domain + cancer drug<br />
**[[3ik3]], [[3oy3]] - mTK kinase domain (mutant) + cancer drug<br />
**[[3ik3]], [[3oy3]] - mTK kinase domain (mutant) + cancer drug<br />
 +
**[[6hd4]], [[6hd6]] - mTK kinase domain + cancer drug + inhibitor<br />
*Abl1 SH2-kinase domain residues 119-531
*Abl1 SH2-kinase domain residues 119-531
Line 134: Line 137:
**[[3gvu]] - hTK kinase domain + Gleevec<br />
**[[3gvu]] - hTK kinase domain + Gleevec<br />
**[[3hmi]] - hTK kinase domain + inhibitor<br />
**[[3hmi]] - hTK kinase domain + inhibitor<br />
-
**[[2xyn]] - hTK kinase domain + cancer drug<br />
+
**[[2xyn]], [[4xli]] - hTK kinase domain + cancer drug<br />
*Abl2 C-terminal residues 1058-1182
*Abl2 C-terminal residues 1058-1182
Line 166: Line 169:
**[[1blj]], [[1blk]] - mTK p55-blk SH2 domain – NMR<BR />
**[[1blj]], [[1blk]] - mTK p55-blk SH2 domain – NMR<BR />
-
* '''Src tyrosine kinase''' (Domains: SH3 85-140; SH2 140-251; kinase 253-535)
+
* '''Src tyrosine kinase''' or proto-oncogene tyrosine protein kinase (Domains: SH3 85-140; SH2 140-251; kinase 253-535)
*Src tyrosine kinase SH2 domain
*Src tyrosine kinase SH2 domain
Line 271: Line 274:
**[[1xbb]] - Syk kinase domain + Gleevec<br />
**[[1xbb]] - Syk kinase domain + Gleevec<br />
**[[1xbc]] - Syk kinase domain + staurosporine<br />
**[[1xbc]] - Syk kinase domain + staurosporine<br />
-
**[[3emg]], [[3fqe]], [[3fqh]], [[3fqs]], [[3srv]], [[4dfl]], [[4dfn]], [[3vf8]], [[3vf9]], [[3tub]], [[3tuc]], [[3tud]], [[4f4p]], [[4fyn]], [[4fyo]], [[4fz6]], [[4fz7]], [[4gfg]], [[4i0r]], [[4i0s]], [[4i0t]], [[4puz]], [[4pv0]], [[4rx7]], [[4rx8]], [[4rx9]], [[5lma]], [[5lmb]], [[5ghv]], [[4wnm]], [[4xg3]], [[4xg4]], [[4xg6]], [[4xg7]], [[4xg8]], [[4xg9]], [[4rss]], [[4yjv]], [[5c26]], [[5c27]], [[4yjo]], [[4yjp]], [[4yjq]], [[4yjr]], [[4yjs]], [[4yjt]], [[4yju]], [[5tr6]], [[5tt7]], [[5tiu]], [[5t68]], [[5y5t]], [[5y5u]] - Syk kinase domain + inhibitor<br />
+
**[[3emg]], [[3fqe]], [[3fqh]], [[3fqs]], [[3srv]], [[4dfl]], [[4dfn]], [[3vf8]], [[3vf9]], [[3tub]], [[3tuc]], [[3tud]], [[4f4p]], [[4fyn]], [[4fyo]], [[4fz6]], [[4fz7]], [[4gfg]], [[4i0r]], [[4i0s]], [[4i0t]], [[4puz]], [[4pv0]], [[4rx7]], [[4rx8]], [[4rx9]], [[5lma]], [[5lmb]], [[5ghv]], [[4wnm]], [[4xg3]], [[4xg4]], [[4xg6]], [[4xg7]], [[4xg8]], [[4xg9]], [[4rss]], [[4yjv]], [[5c26]], [[5c27]], [[4yjo]], [[4yjp]], [[4yjq]], [[4yjr]], [[4yjs]], [[4yjt]], [[4yju]], [[5tr6]], [[5tt7]], [[5tiu]], [[5t68]], [[5y5t]], [[5y5u]], [[4gfg]], [[6hm6]], [[6hm7]] - Syk kinase domain + inhibitor<br />
-
**[[4px6]] - Syk kinase domain (mutant) + inhibitor<br />
+
**[[4px6]], [[5cxh]], [[5cxz]], [[5cy3]] - Syk kinase domain (mutant) + inhibitor<br />
**[[1csy]], [[1csz]] - Syk SH2 domain + phosphopeptide – NMR<BR />
**[[1csy]], [[1csz]] - Syk SH2 domain + phosphopeptide – NMR<BR />
**[[4fl1]], [[4fl2]] - Syk kinase domain + ANP<br />
**[[4fl1]], [[4fl2]] - Syk kinase domain + ANP<br />
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**[[1a81]] – Syk tandem SH2 domain + T-cell surface peptide <br />
**[[1a81]] – Syk tandem SH2 domain + T-cell surface peptide <br />
-
*'''Itk/Tsk tyrosine kinase'''
+
*'''Itk/Tsk tyrosine kinase''' or interleukin-2 tyrosine kinase; domains – SH2 236-344; SH3 160-236; kinase 357-620
**[[1lui]], [[1luk]], [[1lum]], [[1lun]] – mTK Itk SH2 domain – NMR<BR />
**[[1lui]], [[1luk]], [[1lum]], [[1lun]] – mTK Itk SH2 domain – NMR<BR />
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**[[3t9t]] – hTK Itk kinase domain (mutant) + arthritis drug<BR />
**[[3t9t]] – hTK Itk kinase domain (mutant) + arthritis drug<BR />
**[[2e6i]] – hTK Itk BTK motif – NMR<BR />
**[[2e6i]] – hTK Itk BTK motif – NMR<BR />
-
**[[4l7s]], [[4m0y]], [[4m0z]], [[4m12]], [[4m13]], [[4m14]], [[4m15]], [[4mf0]], [[4mf1]] - hTK Itk kinase domain + inhibitor<br />
+
**[[4l7s]], [[4m0y]], [[4m0z]], [[4m12]], [[4m13]], [[4m14]], [[4m15]], [[4mf0]], [[4mf1]], [[3v5j]], [[3v5l]], [[3v8t]], [[3v8w]] - hTK Itk kinase domain + inhibitor<br />
-
**[[4pp9]], [[4ppa]], [[4ppb]], [[4ppc]], [[4pqn]], [[4qd6]], [[4rfm]] - hTK Itk kinase domain (mutant) + inhibitor<br />
+
**[[4pp9]], [[4ppa]], [[4ppb]], [[4ppc]], [[4pqn]], [[4qd6]], [[4rfm]], [[4kio]] - hTK Itk kinase domain (mutant) + inhibitor<br />
-
*'''Zap tyrosine kinase'''
+
*'''Zap-70 tyrosine kinase''' (Domains: SH2 1-259; kinase 327-606
-
**[[4k2r]] – hTK Zap<br />
+
**[[4k2r]] – hTK Zap-70<br />
-
**[[2ozo]] - hTK Zap (mutant) <br />
+
**[[2ozo]] - hTK Zap-70 (mutant) <br />
-
**[[1m61]] - hTK Zap SH2 domain
+
**[[1m61]] - hTK Zap-70 SH2 domain
-
*Zap complex
+
*Zap-70 complex
-
**[[2oq1]], [[4xz1]] - hTK Zap SH2 domain + peptide<br />
+
**[[2oq1]], [[4xz1]] - hTK Zap-70 SH2 domain + peptide<br />
-
**[[4xz0]] - hTK Zap SH2 domain + inhibitor<br />
+
**[[4xz0]] - hTK Zap-70 SH2 domain + inhibitor<br />
-
**[[1u59]] - hTK Zap kinase domain + staurosporine
+
**[[1u59]] - hTK Zap-70 kinase domain + staurosporine
*'''Pyk2 tyrosine kinase or or protein-tyrosine kinase 2-β (Domains: kinase 414-692; FAT 861-1009)'''
*'''Pyk2 tyrosine kinase or or protein-tyrosine kinase 2-β (Domains: kinase 414-692; FAT 861-1009)'''
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**[[3fzp]] - hTK Pyk2 kinase domain + ATPγS<br />
**[[3fzp]] - hTK Pyk2 kinase domain + ATPγS<br />
-
**[[3fzr]], [[3fzs]], [[3fzt]], [[3h3c]], [[3et7]], [[5to8]], [[5tob]] - hTK Pyk2 kinase domain + inhibitor<br />
+
**[[3fzr]], [[3fzs]], [[3fzt]], [[3h3c]], [[3et7]], [[5to8]], [[5tob]], [[4h1j]], [[4h1m]] - hTK Pyk2 kinase domain + inhibitor<br />
**[[3gm1]], [[4r32]] - hTK Pyk2 FAT domain + paxillin peptide<br />
**[[3gm1]], [[4r32]] - hTK Pyk2 FAT domain + paxillin peptide<br />
**[[4xek]], [[4xev]], [[4xef]] - hTK Pyk2 FAT domain + leupaxin peptide<br />
**[[4xek]], [[4xev]], [[4xef]] - hTK Pyk2 FAT domain + leupaxin peptide<br />
Line 341: Line 344:
**[[5d7v]], [[6cz2]] - hTK Ptk6 kinase domain <br />
**[[5d7v]], [[6cz2]] - hTK Ptk6 kinase domain <br />
**[[5da3]], [[6cz3]], [[6cz4]] - hTK Ptk6 kinase domain + inhibitor<br />
**[[5da3]], [[6cz3]], [[6cz4]] - hTK Ptk6 kinase domain + inhibitor<br />
-
**[[5h2u]] - hTK Ptk6 kinase domain + drug<br />
+
**[[5h2u]] - hTK Ptk6 kinase domain (mutant) + cancer drug<br />
 +
 
 +
*'''PtkA tyrosine kinase'''
 +
 
 +
**[[6f2x]] - TK PtkA – ''Mycobacterium tuberculosis'' - NMR<br />
*'''Lyn tyrosine kinase''' (Domains: SH3 39-101; SH2 115-229; kinase 239-512)
*'''Lyn tyrosine kinase''' (Domains: SH3 39-101; SH2 115-229; kinase 239-512)
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**[[4po6]] - hTK Tyk2 SH2+FERM domains + IFNAR1 peptide<br />
**[[4po6]] - hTK Tyk2 SH2+FERM domains + IFNAR1 peptide<br />
-
*'''Hck tyrosine kinase''' Domains: SH3 81-137; SH2 119-224; SH1 or kinase 225-525;
+
*'''Hck tyrosine kinase''' Domains: SH3 81-137; SH2 119-224; SH1 or kinase+C-terminal 225-525;
**[[3hck]] - hTK SH2 domain - NMR<BR />
**[[3hck]] - hTK SH2 domain - NMR<BR />
Line 416: Line 423:
**[[5h0b]], [[5h0e]], [[5h0g]], [[5h0h]] - hTK SH3-SH2-SH1 domain (mutant) + inhibitor<BR />
**[[5h0b]], [[5h0e]], [[5h0g]], [[5h0h]] - hTK SH3-SH2-SH1 domain (mutant) + inhibitor<BR />
**[[2hk5]], [[5zj6]] - hTK kinase domain + inhibitor<BR />
**[[2hk5]], [[5zj6]] - hTK kinase domain + inhibitor<BR />
-
**[[1qcf]], [[3vry]], [[3vrz]], [[3vs0]], [[3vs1]], [[3vs2]], [[3vs3]], [[3vs4]], [[3vs5]], [[3vs6]], [[3vs7]] - hTK SH3-SH2-kinase-tail domain + inhibitor<BR />
+
**[[1qcf]], [[3vrz]], [[3vs0]], [[3vs3]], [[3vs4]], [[3vs5]], [[3vs6]], [[3vs7]] - hTK SH3-SH2-kinase-C-terminal domain + inhibitor<BR />
-
**[[1ad5]] - hTK SH3-SH2-kinase-tail domain + AMPPNP<BR />
+
**[[3vry]], [[3vs1]], [[3vs2]] - hTK SH3-SH2-kinase-C-terminal domain (mutant) + inhibitor<BR />
-
**[[2hck]] - hTK SH3-SH2-kinase-tail domain + quercetin<BR />
+
**[[1ad5]] - hTK SH3-SH2-kinase-C-terminal domain + AMPPNP<BR />
-
**[[4lud]], [[4lue]] - hTK SH2+SH3+kinase domain (mutant) + fluorescent compound<br />
+
**[[2hck]] - hTK SH3-SH2-kinase-C-terminal domain + quercetin<BR />
 +
**[[4lud]], [[4lue]] - hTK SH2+SH3+kinase+C-terrminal domain (mutant) + fluorescent compound<br />
 +
 
 +
*'''Ack1 tyrosine kinase''' or activated cdc42 kinase 1
 +
 
 +
**[[1u46]], [[4hzr]] - hTK Ack1 kinase domain <br />
 +
**[[4hzs]] - hTK Ack1 kinase+SH3 domains <br />
 +
**[[1u4d]], [[3eqp]], [[3eqr]], [[4ewh]], [[4id7]], [[5zxb]] - hTK Ack1 kinase domain + inhibitor<br />
*'''RECEPTOR TYROSINE KINASES - RTK'''
*'''RECEPTOR TYROSINE KINASES - RTK'''

Revision as of 11:10, 25 December 2018

Human Fyn tyrosine kinase kinase domain with phosphotyrosine in stick model complex with inhibitor staurosporine (PDB code 2dq7).

Drag the structure with the mouse to rotate

3D structures of tyrosine kinase

Updated on 25-December-2018

  1. Hubbard SR, Till JH. Protein tyrosine kinase structure and function. Annu Rev Biochem. 2000;69:373-98. PMID:10966463 doi:http://dx.doi.org/10.1146/annurev.biochem.69.1.373
  2. Roskoski R Jr. Src protein-tyrosine kinase structure and regulation. Biochem Biophys Res Commun. 2004 Nov 26;324(4):1155-64. PMID:15504335 doi:http://dx.doi.org/10.1016/j.bbrc.2004.09.171
  3. Tolomeo M, Dieli F, Gebbia N, Simoni D. Tyrosine kinase inhibitors for the treatment of chronic myeloid leukemia. Anticancer Agents Med Chem. 2009 Oct;9(8):853-63. PMID:19538165
  4. Lengyel E, Sawada K, Salgia R. Tyrosine kinase mutations in human cancer. Curr Mol Med. 2007 Feb;7(1):77-84. PMID:17311534
  5. Kinoshita T, Matsubara M, Ishiguro H, Okita K, Tada T. Structure of human Fyn kinase domain complexed with staurosporine. Biochem Biophys Res Commun. 2006 Aug 4;346(3):840-4. Epub 2006 Jun 13. PMID:16782058 doi:10.1016/j.bbrc.2006.05.212
  6. Tou WI, Chen CY. Traditional Chinese medicine as dual guardians against hypertension and cancer? J Biomol Struct Dyn. 2012 Jul;30(3):299-317. Epub 2012 Jun 12. PMID:22694277 doi:10.1080/07391102.2012.680030

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Michal Harel, Alexander Berchansky, Joel L. Sussman

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