This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
3khy
From Proteopedia
(Difference between revisions)
| (5 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
| - | {{Seed}} | ||
| - | [[Image:3khy.jpg|left|200px]] | ||
| - | + | ==Crystal Structure of a propionate kinase from Francisella tularensis subsp. tularensis SCHU S4== | |
| - | + | <StructureSection load='3khy' size='340' side='right' caption='[[3khy]], [[Resolution|resolution]] 1.98Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | + | <table><tr><td colspan='2'>[[3khy]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/"francisella_tularensis_subsp._nearctica"_olsufjev_1970 "francisella tularensis subsp. nearctica" olsufjev 1970]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3KHY OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3KHY FirstGlance]. <br> | |
| - | + | </td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> | |
| - | + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">FTT1753, FTT_1753, tdcD ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=119856 "Francisella tularensis subsp. nearctica" Olsufjev 1970])</td></tr> | |
| - | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3khy FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3khy OCA], [http://pdbe.org/3khy PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3khy RCSB], [http://www.ebi.ac.uk/pdbsum/3khy PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3khy ProSAT]</span></td></tr> | |
| - | + | </table> | |
| - | + | == Evolutionary Conservation == | |
| - | + | [[Image:Consurf_key_small.gif|200px|right]] | |
| - | + | Check<jmol> | |
| - | == | + | <jmolCheckbox> |
| - | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/kh/3khy_consurf.spt"</scriptWhenChecked> | |
| - | [[ | + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> |
| - | [[Category: Anderson, W F | + | <text>to colour the structure by Evolutionary Conservation</text> |
| - | [[Category: Brunzelle, J S | + | </jmolCheckbox> |
| - | [[Category: | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3khy ConSurf]. |
| - | [[Category: Savchenko, A | + | <div style="clear:both"></div> |
| - | [[Category: Sharma, S | + | __TOC__ |
| - | [[Category: Skarina, T | + | </StructureSection> |
| - | [[Category: Wang, Y | + | [[Category: Francisella tularensis subsp. nearctica olsufjev 1970]] |
| + | [[Category: Anderson, W F]] | ||
| + | [[Category: Brunzelle, J S]] | ||
| + | [[Category: Structural genomic]] | ||
| + | [[Category: Savchenko, A]] | ||
| + | [[Category: Sharma, S]] | ||
| + | [[Category: Skarina, T]] | ||
| + | [[Category: Wang, Y]] | ||
[[Category: Atp-binding]] | [[Category: Atp-binding]] | ||
| - | [[Category: Center for structural genomics of infectious disease]] | ||
[[Category: Csgid]] | [[Category: Csgid]] | ||
[[Category: Department of health and human service]] | [[Category: Department of health and human service]] | ||
| Line 33: | Line 37: | ||
[[Category: Nucleotide-binding]] | [[Category: Nucleotide-binding]] | ||
[[Category: Propionate kinase]] | [[Category: Propionate kinase]] | ||
| - | [[Category: Structural genomic]] | ||
[[Category: Transferase]] | [[Category: Transferase]] | ||
| - | |||
| - | ''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jan 20 15:59:26 2010'' | ||
Current revision
Crystal Structure of a propionate kinase from Francisella tularensis subsp. tularensis SCHU S4
| |||||||||||
Categories: Francisella tularensis subsp. nearctica olsufjev 1970 | Anderson, W F | Brunzelle, J S | Structural genomic | Savchenko, A | Sharma, S | Skarina, T | Wang, Y | Atp-binding | Csgid | Department of health and human service | Idp01739 | Kinase | National institute of allergy and infectious disease | National institutes of health | Nucleotide-binding | Propionate kinase | Transferase
