This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3kn3

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
(New page: '''Unreleased structure''' The entry 3kn3 is ON HOLD Authors: Kim, Y., Volkart, L., Bearden, J., Joachimiak, A., Midwest Center for Structural Genomics (MCSG) Description: Crystal Stru...)
Current revision (09:45, 26 December 2018) (edit) (undo)
 
(6 intermediate revisions not shown.)
Line 1: Line 1:
-
'''Unreleased structure'''
 
-
The entry 3kn3 is ON HOLD
+
==Crystal Structure of LysR Substrate Binding Domain (25-263) of Putative Periplasmic Protein from Wolinella succinogenes==
-
 
+
<StructureSection load='3kn3' size='340' side='right' caption='[[3kn3]], [[Resolution|resolution]] 2.41&Aring;' scene=''>
-
Authors: Kim, Y., Volkart, L., Bearden, J., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[3kn3]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Atcc_29543 Atcc 29543]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3KN3 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3KN3 FirstGlance]. <br>
-
Description: Crystal Structure of LysR Substrate Binding Domain (25-263) of Putative Periplasmic Protein from Wolinella succinogenes
+
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ACY:ACETIC+ACID'>ACY</scene>, <scene name='pdbligand=CIT:CITRIC+ACID'>CIT</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=GSH:GLUTATHIONE'>GSH</scene></td></tr>
-
 
+
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Nov 18 18:59:39 2009''
+
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">WS1370 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=844 ATCC 29543])</td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3kn3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3kn3 OCA], [http://pdbe.org/3kn3 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3kn3 RCSB], [http://www.ebi.ac.uk/pdbsum/3kn3 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3kn3 ProSAT]</span></td></tr>
 +
</table>
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/kn/3kn3_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3kn3 ConSurf].
 +
<div style="clear:both"></div>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Atcc 29543]]
 +
[[Category: Bearden, J]]
 +
[[Category: Joachimiak, A]]
 +
[[Category: Kim, Y]]
 +
[[Category: Structural genomic]]
 +
[[Category: Volkart, L]]
 +
[[Category: Alpha-beta structure]]
 +
[[Category: Mcsg]]
 +
[[Category: Periplasmic binding protein fold]]
 +
[[Category: PSI, Protein structure initiative]]
 +
[[Category: Transcription]]

Current revision

Crystal Structure of LysR Substrate Binding Domain (25-263) of Putative Periplasmic Protein from Wolinella succinogenes

3kn3, resolution 2.41Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools