Abrin
From Proteopedia
(Difference between revisions)
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<scene name='77/778334/Alpha_chain/1'></scene> | <scene name='77/778334/Alpha_chain/1'></scene> | ||
==Abrin== | ==Abrin== | ||
- | <StructureSection load='1ABR' size='340' side='right' caption=' | + | <StructureSection load='1ABR' size='340' side='right' caption='Glycosylated abrin (PDB code [[1abr]])' scene=''> |
== Introduction == | == Introduction == | ||
- | Abrus precatorius (or rosary peas) contain the protein abrin. Rosary peas are red and oval-shaped with a black edge towards one end. In some cultures, they are used to make beaded jewelry. Abrin can exhibit beneficial uses for medical research, but it can also be destructive if it directly enters an organism’s body because of its toxic properties. | + | ''Abrus precatorius'' (or rosary peas) contain the protein '''abrin'''. Rosary peas are red and oval-shaped with a black edge towards one end. In some cultures, they are used to make beaded jewelry. Abrin can exhibit beneficial uses for medical research, but it can also be destructive if it directly enters an organism’s body because of its toxic properties. |
== Structure == | == Structure == | ||
Abrin is referred to as a type-2 ribosome-inactivating protein (RIP). The protein contains two chains:<scene name='77/778334/A_chain/1'> α</scene> and <scene name='77/778334/Abrin_b_chain/1'>β</scene> which are connected by a disulfide bond. Both of the chains are <scene name='77/778334/Water/1'>water soluble</scene>. The water molecules hydrolyze the N-C glycosidic bond. The β chain allows the α chain to enter a cell because it attaches to the carbohydrate receptors. The β is composed of the following amino acids: Ile-Val-Glu-Lys-Ser-Lys-Ile-Ser-Ser-Ser-Arg-Tyr-Glu-Pro-Thr. The α chain is known as an N-glycosidase <ref>DOI:10.1093/abbs/gmw023</ref>. Once the α chain is in a cell, the chain removes adenine bases and links to the 28S rRNA<ref>DOI: 10.1007/s13181-013-0377-9</ref>. The attachment causes the ribosome to be incompetent when trying to connect to an elongation factor leading to an inhibition of protein synthesis. | Abrin is referred to as a type-2 ribosome-inactivating protein (RIP). The protein contains two chains:<scene name='77/778334/A_chain/1'> α</scene> and <scene name='77/778334/Abrin_b_chain/1'>β</scene> which are connected by a disulfide bond. Both of the chains are <scene name='77/778334/Water/1'>water soluble</scene>. The water molecules hydrolyze the N-C glycosidic bond. The β chain allows the α chain to enter a cell because it attaches to the carbohydrate receptors. The β is composed of the following amino acids: Ile-Val-Glu-Lys-Ser-Lys-Ile-Ser-Ser-Ser-Arg-Tyr-Glu-Pro-Thr. The α chain is known as an N-glycosidase <ref>DOI:10.1093/abbs/gmw023</ref>. Once the α chain is in a cell, the chain removes adenine bases and links to the 28S rRNA<ref>DOI: 10.1007/s13181-013-0377-9</ref>. The attachment causes the ribosome to be incompetent when trying to connect to an elongation factor leading to an inhibition of protein synthesis. | ||
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</StructureSection> | </StructureSection> | ||
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+ | ==3D structures of abrin== | ||
+ | Updated on {{REVISIONDAY2}}-{{MONTHNAME|{{REVISIONMONTH}}}}-{{REVISIONYEAR}} | ||
+ | |||
+ | [[1abr]], [[5z37]] – IlAbr-A – Indian licorice<br /> | ||
+ | [[5z3i]] – IlAbr-A + adenine<br /> | ||
+ | [[5z3j]] – IlAbr-A + nicotinamide<br /> | ||
== References == | == References == | ||
<references/> | <references/> | ||
+ | |||
+ | [[Category:Topic Page]] |
Revision as of 07:40, 2 January 2019
Abrin
|
3D structures of abrin
Updated on 02-January-2019
1abr, 5z37 – IlAbr-A – Indian licorice
5z3i – IlAbr-A + adenine
5z3j – IlAbr-A + nicotinamide
References
- ↑ Yu Y, Yang R, Zhao X, Qin D, Liu Z, Liu F, Song X, Li L, Feng R, Gao N. Abrin P2 suppresses proliferation and induces apoptosis of colon cancer cells via mitochondrial membrane depolarization and caspase activation. Acta Biochim Biophys Sin (Shanghai). 2016 May;48(5):420-9. doi:, 10.1093/abbs/gmw023. Epub 2016 Apr 6. PMID:27055473 doi:http://dx.doi.org/10.1093/abbs/gmw023
- ↑ Wooten JV, Pittman CT, Blake TA, Thomas JD, Devlin JJ, Higgerson RA, Johnson RC. A case of abrin toxin poisoning, confirmed via quantitation of L-abrine (N-methyl-L-tryptophan) biomarker. J Med Toxicol. 2014 Dec;10(4):392-4. doi: 10.1007/s13181-013-0377-9. PMID:24522983 doi:http://dx.doi.org/10.1007/s13181-013-0377-9
- ↑ Yu Y, Yang R, Zhao X, Qin D, Liu Z, Liu F, Song X, Li L, Feng R, Gao N. Abrin P2 suppresses proliferation and induces apoptosis of colon cancer cells via mitochondrial membrane depolarization and caspase activation. Acta Biochim Biophys Sin (Shanghai). 2016 May;48(5):420-9. doi:, 10.1093/abbs/gmw023. Epub 2016 Apr 6. PMID:27055473 doi:http://dx.doi.org/10.1093/abbs/gmw023
- ↑ Wooten JV, Pittman CT, Blake TA, Thomas JD, Devlin JJ, Higgerson RA, Johnson RC. A case of abrin toxin poisoning, confirmed via quantitation of L-abrine (N-methyl-L-tryptophan) biomarker. J Med Toxicol. 2014 Dec;10(4):392-4. doi: 10.1007/s13181-013-0377-9. PMID:24522983 doi:http://dx.doi.org/10.1007/s13181-013-0377-9
- ↑ Alhamdani M, Brown B, Narula P. Abrin poisoning in an 18-month-old child. Am J Case Rep. 2015 Mar 10;16:146-8. doi: 10.12659/AJCR.892917. PMID:25754813 doi:http://dx.doi.org/10.12659/AJCR.892917
- ↑ Huang J, Zhang W, Li X, Feng S, Ye G, Wei H, Gong X. Acute abrin poisoning treated with continuous renal replacement therapy and hemoperfusion successfully: A case report. Medicine (Baltimore). 2017 Jul;96(27):e7423. doi: 10.1097/MD.0000000000007423. PMID:28682903 doi:http://dx.doi.org/10.1097/MD.0000000000007423
- ↑ "Facts About Abrin.” Centers for Disease Control and Prevention, Centers for Disease Control and Prevention, 18 Nov. 2015, emergency.cdc.gov/agent/abrin/basics/facts.asp.
- ↑ Wang J, Gao S, Xin W, Kang L, Xu N, Zhang T, Liu W, Wang J. A novel recombinant vaccine protecting mice against abrin intoxication. Hum Vaccin Immunother. 2015;11(6):1361-7. doi: 10.1080/21645515.2015.1008879. PMID:26086588 doi:http://dx.doi.org/10.1080/21645515.2015.1008879