This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
3mn2
From Proteopedia
(Difference between revisions)
| (4 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
| - | {{Seed}} | ||
| - | [[Image:3mn2.jpg|left|200px]] | ||
| - | + | ==The crystal structure of a probable AraC family transcriptional regulator from Rhodopseudomonas palustris CGA009== | |
| - | + | <StructureSection load='3mn2' size='340' side='right' caption='[[3mn2]], [[Resolution|resolution]] 1.80Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | + | <table><tr><td colspan='2'>[[3mn2]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Rhopa Rhopa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3MN2 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3MN2 FirstGlance]. <br> | |
| - | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr> | |
| - | + | <tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> | |
| - | + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">RPA0567 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=258594 RHOPA])</td></tr> | |
| - | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3mn2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3mn2 OCA], [http://pdbe.org/3mn2 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3mn2 RCSB], [http://www.ebi.ac.uk/pdbsum/3mn2 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3mn2 ProSAT]</span></td></tr> | |
| - | + | </table> | |
| - | + | == Evolutionary Conservation == | |
| - | + | [[Image:Consurf_key_small.gif|200px|right]] | |
| - | == | + | Check<jmol> |
| - | + | <jmolCheckbox> | |
| - | [[Category: | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/mn/3mn2_consurf.spt"</scriptWhenChecked> |
| - | [[Category: Buck, K | + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> |
| - | [[Category: Joachimiak, A | + | <text>to colour the structure by Evolutionary Conservation</text> |
| - | [[Category: Li, H | + | </jmolCheckbox> |
| - | [[Category: | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3mn2 ConSurf]. |
| - | [[Category: Tan, K | + | <div style="clear:both"></div> |
| + | __TOC__ | ||
| + | </StructureSection> | ||
| + | [[Category: Rhopa]] | ||
| + | [[Category: Buck, K]] | ||
| + | [[Category: Joachimiak, A]] | ||
| + | [[Category: Li, H]] | ||
| + | [[Category: Structural genomic]] | ||
| + | [[Category: Tan, K]] | ||
[[Category: Mcsg]] | [[Category: Mcsg]] | ||
| - | [[Category: | + | [[Category: PSI, Protein structure initiative]] |
| - | + | ||
| - | + | ||
| - | + | ||
[[Category: Transcription regulator]] | [[Category: Transcription regulator]] | ||
| - | |||
| - | ''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed May 12 11:26:11 2010'' | ||
Current revision
The crystal structure of a probable AraC family transcriptional regulator from Rhodopseudomonas palustris CGA009
| |||||||||||

