This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
2dp6
From Proteopedia
(Difference between revisions)
| Line 1: | Line 1: | ||
| + | |||
==Crystal structure of uracil-DNA glycosylase in complex with AP:C containing DNA== | ==Crystal structure of uracil-DNA glycosylase in complex with AP:C containing DNA== | ||
<StructureSection load='2dp6' size='340' side='right' caption='[[2dp6]], [[Resolution|resolution]] 1.80Å' scene=''> | <StructureSection load='2dp6' size='340' side='right' caption='[[2dp6]], [[Resolution|resolution]] 1.80Å' scene=''> | ||
| Line 6: | Line 7: | ||
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[2d3y|2d3y]], [[2ddg|2ddg]], [[2dem|2dem]]</td></tr> | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[2d3y|2d3y]], [[2ddg|2ddg]], [[2dem|2dem]]</td></tr> | ||
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">ttUDGB ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=300852 THET8])</td></tr> | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">ttUDGB ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=300852 THET8])</td></tr> | ||
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2dp6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2dp6 OCA], [http://pdbe.org/2dp6 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2dp6 RCSB], [http://www.ebi.ac.uk/pdbsum/2dp6 PDBsum], [http://www.topsan.org/Proteins/RSGI/2dp6 TOPSAN]</span></td></tr> | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2dp6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2dp6 OCA], [http://pdbe.org/2dp6 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2dp6 RCSB], [http://www.ebi.ac.uk/pdbsum/2dp6 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2dp6 ProSAT], [http://www.topsan.org/Proteins/RSGI/2dp6 TOPSAN]</span></td></tr> |
</table> | </table> | ||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
| Line 12: | Line 13: | ||
Check<jmol> | Check<jmol> | ||
<jmolCheckbox> | <jmolCheckbox> | ||
| - | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/dp/2dp6_consurf.spt"</scriptWhenChecked> | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/dp/2dp6_consurf.spt"</scriptWhenChecked> |
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
| Line 21: | Line 22: | ||
==See Also== | ==See Also== | ||
*[[DNA glycosylase|DNA glycosylase]] | *[[DNA glycosylase|DNA glycosylase]] | ||
| - | *[[Uracil-DNA glycosylase|Uracil-DNA glycosylase]] | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
Revision as of 09:53, 30 January 2019
Crystal structure of uracil-DNA glycosylase in complex with AP:C containing DNA
| |||||||||||
Categories: Thet8 | Hoseki, J | Kosaka, H | Kuramitsu, S | Masui, R | Nakagawa, N | Structural genomic | Base excision repair | Dna complex | Hydrolase-dna complex | Iron/sulfer cluster | National project on protein structural and functional analyse | Nppsfa | Rsgi | Thermophile | Uracil-dna glycosylase
