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3nyi
From Proteopedia
(Difference between revisions)
(New page: '''Unreleased structure''' The entry 3nyi is ON HOLD until 00 0001 Authors: Zhang, R., Tan, K., Li, H., Keigher, L., Babnigg, G., Joachimiak, A., Midwest Center for Structural Genomics ...) |
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| - | '''Unreleased structure''' | ||
| - | + | ==The crystal structure of a fat acid (stearic acid)-binding protein from Eubacterium ventriosum ATCC 27560.== | |
| - | + | <StructureSection load='3nyi' size='340' side='right' caption='[[3nyi]], [[Resolution|resolution]] 1.90Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | + | <table><tr><td colspan='2'>[[3nyi]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Eubacterium_ventriosum_atcc_27560 Eubacterium ventriosum atcc 27560]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3NYI OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3NYI FirstGlance]. <br> | |
| - | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=STE:STEARIC+ACID'>STE</scene></td></tr> | |
| - | + | <tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> | |
| - | '' | + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">EUBVEN_01190 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=411463 Eubacterium ventriosum ATCC 27560])</td></tr> |
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3nyi FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3nyi OCA], [http://pdbe.org/3nyi PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3nyi RCSB], [http://www.ebi.ac.uk/pdbsum/3nyi PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3nyi ProSAT]</span></td></tr> | ||
| + | </table> | ||
| + | == Evolutionary Conservation == | ||
| + | [[Image:Consurf_key_small.gif|200px|right]] | ||
| + | Check<jmol> | ||
| + | <jmolCheckbox> | ||
| + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ny/3nyi_consurf.spt"</scriptWhenChecked> | ||
| + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3nyi ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
| + | [[Category: Eubacterium ventriosum atcc 27560]] | ||
| + | [[Category: Babnigg, G]] | ||
| + | [[Category: Joachimiak, A]] | ||
| + | [[Category: Keigher, L]] | ||
| + | [[Category: Li, H]] | ||
| + | [[Category: Structural genomic]] | ||
| + | [[Category: Tan, K]] | ||
| + | [[Category: Zhang, R]] | ||
| + | [[Category: Degv family protein]] | ||
| + | [[Category: Lipid binding protein]] | ||
| + | [[Category: Mcsg]] | ||
| + | [[Category: PSI, Protein structure initiative]] | ||
| + | [[Category: Stearic acid]] | ||
Current revision
The crystal structure of a fat acid (stearic acid)-binding protein from Eubacterium ventriosum ATCC 27560.
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