Aldehyde dehydrogenase
From Proteopedia
(Difference between revisions)
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*<scene name='44/447036/Cv/10'>Dithiothreitol binding</scene>. | *<scene name='44/447036/Cv/10'>Dithiothreitol binding</scene>. | ||
*<scene name='44/447036/Cv/11'>Dimercaptobutane-diol binding</scene>. | *<scene name='44/447036/Cv/11'>Dimercaptobutane-diol binding</scene>. | ||
| + | |||
| + | == 3D Structures of aldehyde dehydrogenase == | ||
| + | [[Aldehyde dehydrogenase 3D structures]] | ||
| + | |||
</StructureSection> | </StructureSection> | ||
== 3D Structures of Aldehyde dehydrogenase == | == 3D Structures of Aldehyde dehydrogenase == | ||
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**[[1a4z]] – bALDH2 NAD-binding domain + NAD<BR /> | **[[1a4z]] – bALDH2 NAD-binding domain + NAD<BR /> | ||
**[[1bi9]] – rALDH2 + NAD<br /> | **[[1bi9]] – rALDH2 + NAD<br /> | ||
| - | **[[4pxl]] – | + | **[[4pxl]] – mALDH2 + NAD - maize<br /> |
| + | **[[4pz2]] – mALDH6 + NAD <br /> | ||
| + | **[[6d97]] – mALDH12 + NAD <br /> | ||
*ALDH2 ternary complex | *ALDH2 ternary complex | ||
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**[[4qje]] - Betaine-SaALDH (mutant)<br /> | **[[4qje]] - Betaine-SaALDH (mutant)<br /> | ||
**[[4zxu]], [[4zwl]] - Betaine-SaALDH (mutant) + NAD<br /> | **[[4zxu]], [[4zwl]] - Betaine-SaALDH (mutant) + NAD<br /> | ||
| - | **[[4cbb]] - Betaine-PaALDH - ''Pseudomonas aeruginosa''<br /> | + | **[[4cbb]], [[6bpg]] - Betaine-PaALDH - ''Pseudomonas aeruginosa''<br /> |
| + | **[[6bjp]] - Betaine-PaALDH (mutant)<br /> | ||
**[[1a4s]] - Betaine-cALDH - cod<BR /> | **[[1a4s]] - Betaine-cALDH - cod<BR /> | ||
**[[3vos]], [[3tz6]], [[3vos]] – Aspartate-semi-MtALDH<BR /> | **[[3vos]], [[3tz6]], [[3vos]] – Aspartate-semi-MtALDH<BR /> | ||
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**[[4qet]] – BcALDH (mutant)<br /> | **[[4qet]] – BcALDH (mutant)<br /> | ||
**[[5uju]] - BmALDH – ''Burkholderia multivorans''<br /> | **[[5uju]] - BmALDH – ''Burkholderia multivorans''<br /> | ||
| + | **[[6fk3]], [[6fkv]], [[6fjv]] - TtALDH – ''Thermus thermophilus''<br /> | ||
*NAD-dependent ALDH binary complexes | *NAD-dependent ALDH binary complexes | ||
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**[[4qn2]], [[5ez4]], [[5eyu]], [[5dib]] - Betaine-SaALDH (mutant) + NAD<br /> | **[[4qn2]], [[5ez4]], [[5eyu]], [[5dib]] - Betaine-SaALDH (mutant) + NAD<br /> | ||
**[[1bpw]] - Betaine-cALDH + NAD<BR /> | **[[1bpw]] - Betaine-cALDH + NAD<BR /> | ||
| - | **[[2j6l]] – Aminoadipate-semi-hALDH family 7 + NAD<BR /> | + | **[[4zvw]], [[4zvx]] - Aminoadipate-semi-hALDH family 7<br /> |
| + | **[[2j6l]], [[4zvy]] – Aminoadipate-semi-hALDH family 7 + NAD<BR /> | ||
| + | **[[4x0u]] - Aminoadipate-semi-hALDH family 7+ inhibitor<br /> | ||
| + | **[[4zuk]] - Aminoadipate-semi-hALDH family 7+ NAD<br /> | ||
| + | **[[4zul]] - Aminoadipate-semi-hALDH family 7+ α-aminoadipate<br /> | ||
**[[2cfi]] - Formyltetrahydrofolate-hALDH hydrolase domain + formyltetrahydropterin<BR /> | **[[2cfi]] - Formyltetrahydrofolate-hALDH hydrolase domain + formyltetrahydropterin<BR /> | ||
**[[2nad]] - Formate-PaALDH + NAD <BR /> | **[[2nad]] - Formate-PaALDH + NAD <BR /> | ||
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**[[5gtk]] – BcALDH + NAD<br /> | **[[5gtk]] – BcALDH + NAD<br /> | ||
**[[5jfl]] – RpALDH + NAD – ''Rhodopseudomonas palustris''<br /> | **[[5jfl]] – RpALDH + NAD – ''Rhodopseudomonas palustris''<br /> | ||
| + | **[[6gvs]] – RpALDH + NADP <br /> | ||
**[[5jfn]] – RpALDH + CoA <br /> | **[[5jfn]] – RpALDH + CoA <br /> | ||
| + | **[[6fku]] – TtALDH + NADP <br /> | ||
*NAD-dependent ALDH ternary complexes | *NAD-dependent ALDH ternary complexes | ||
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**[[4i3x]] – SmALDH + phosphonoacete + NAD<br /> | **[[4i3x]] – SmALDH + phosphonoacete + NAD<br /> | ||
**[[5jfm]] – RpALDH + CoA + propionyl-CoA<br /> | **[[5jfm]] – RpALDH + CoA + propionyl-CoA<br /> | ||
| + | **[[4x0t]] - Aminoadipate-semi-hALDH family 7 + NAD+ inhibitor<br /> | ||
*NADP-dependent ALDH | *NADP-dependent ALDH | ||
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**[[1vsu]] – CpGAPDH – ''Cryptosporidium parvum''<br /> | **[[1vsu]] – CpGAPDH – ''Cryptosporidium parvum''<br /> | ||
**[[1ywg]] – PfGAPDH – ''Plasmodium falciparum''<br /> | **[[1ywg]] – PfGAPDH – ''Plasmodium falciparum''<br /> | ||
| - | **[[3cmc]] - GAPDH – ''Bacillus stearothermophilus''<br /> | ||
**[[2ep7]] – GAPDH – ''Aquifex aeolicus''<br /> | **[[2ep7]] – GAPDH – ''Aquifex aeolicus''<br /> | ||
**[[2i5p]] – GAPDH – ''Kluyveromyces marxianus''<br /> | **[[2i5p]] – GAPDH – ''Kluyveromyces marxianus''<br /> | ||
**[[1obf]] – GAPDH – ''Achromobacter xylosoxidans''<br /> | **[[1obf]] – GAPDH – ''Achromobacter xylosoxidans''<br /> | ||
**[[1b7g]] – GAPDH – ''Sulfolobus solfataricus''<br /> | **[[1b7g]] – GAPDH – ''Sulfolobus solfataricus''<br /> | ||
| - | **[[2gd1]] – GsGAPDH – ''Geobacillus stearothermophilus''<br /> | + | **[[2gd1]], [[3cmc]] – GsGAPDH – ''Geobacillus stearothermophilus''<br /> |
**[[3e6a]] – OsGAPDH – ''Oryza sativa''<br /> | **[[3e6a]] – OsGAPDH – ''Oryza sativa''<br /> | ||
**[[4gpd]], [[1gpd]], [[1crw]] – GAPDH – lobster<br /> | **[[4gpd]], [[1gpd]], [[1crw]] – GAPDH – lobster<br /> | ||
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**[[5mz8]] – PhpALDH 21 + succinate<br /> | **[[5mz8]] – PhpALDH 21 + succinate<br /> | ||
**[[5n5s]] – PhpALDH 21 + NADP<br /> | **[[5n5s]] – PhpALDH 21 + NADP<br /> | ||
| + | **[[6mvr]] – LoALDH 16 - ''Loktanella''<br /> | ||
| + | **[[6mvu]] – LoALDH 16 (mutant)<br /> | ||
| + | **[[6mvs]], [[6mvt]] – LoALDH 16 + NAD<br /> | ||
*Antiquitin | *Antiquitin | ||
Revision as of 10:02, 4 March 2019
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3D Structures of Aldehyde dehydrogenase
Updated on 04-March-2019
References
- ↑ Keller, Markus A.; Zander, Ulrich; Fuchs, Julian E.; Kreutz, Christoph; Watschinger, Katrin et al. (2014). A gatekeeper helix determines the substrate specificity of Sjögren–Larsson Syndrome enzyme fatty aldehyde dehydrogenase. Nature Communications vol. 5.

