This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
Formyl-CoA transferase
From Proteopedia
| (One intermediate revision not shown.) | |||
| Line 1: | Line 1: | ||
| - | <StructureSection load=' | + | <StructureSection load='' size='350' side='right' caption='Structure of formyl-CoA transferase complex with oxalate, CoA, HEPES buffer and Cl- ion (green) (PDB code [[2vjo]]).' scene='59/593959/Cv/1'> |
== Function == | == Function == | ||
| Line 6: | Line 6: | ||
== Structural highlights == | == Structural highlights == | ||
| - | FCT structure shows <scene name='59/593959/Cv/2'>2 domains: large and small</scene>. The large domain is composed of residues from the N-terminal and the C-terminal. The active site binds <scene name='59/593959/Cv/ | + | FCT structure shows <scene name='59/593959/Cv/2'>2 domains: large and small</scene>. The large domain is composed of residues from the N-terminal and the C-terminal. The active site binds <scene name='59/593959/Cv/10'>oxalate</scene>, <scene name='59/593959/Cv/11'>Cl</scene> and <scene name='59/593959/Cv/12'>CoA</scene> <ref>PMID:18162462</ref>. Water molecules are shown as red spheres. |
</StructureSection> | </StructureSection> | ||
==3D structures of formyl-CoA transferase== | ==3D structures of formyl-CoA transferase== | ||
Current revision
| |||||||||||
3D structures of formyl-CoA transferase
Updated on 28-March-2019
1p5h – OfFCT – Oxalobacter formigenes
1t3z, 2vjn, 2vjp, 2vjq – OfFCT (mutant)
1p5r, 2vjk, 2vjl – OfFCT + CoA
1vgq, 1vgr – OfFCT (mutant) + CoA
1t4c – OfFCT + oxalyl-aspartyl anhydride + CoA
2vjm – OfFCT + aspartyl-formyl anhydride + CoA
2vjo – OfFCT (mutant) + oxalate + CoA
References
- ↑ Ricagno S, Jonsson S, Richards N, Lindqvist Y. Formyl-CoA transferase encloses the CoA binding site at the interface of an interlocked dimer. EMBO J. 2003 Jul 1;22(13):3210-9. PMID:12839984 doi:http://dx.doi.org/10.1093/emboj/cdg333
- ↑ Berthold CL, Toyota CG, Richards NG, Lindqvist Y. Reinvestigation of the catalytic mechanism of formyl-CoA transferase, a class III CoA-transferase. J Biol Chem. 2008 Mar 7;283(10):6519-29. Epub 2007 Dec 27. PMID:18162462 doi:10.1074/jbc.M709353200

