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4tgl

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(New page: 200px<br /><applet load="4tgl" size="450" color="white" frame="true" align="right" spinBox="true" caption="4tgl, resolution 2.6&Aring;" /> '''CATALYSIS AT THE INTE...)
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[[Image:4tgl.jpg|left|200px]]<br /><applet load="4tgl" size="450" color="white" frame="true" align="right" spinBox="true"
 
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caption="4tgl, resolution 2.6&Aring;" />
 
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'''CATALYSIS AT THE INTERFACE: THE ANATOMY OF A CONFORMATIONAL CHANGE IN A TRIGLYCERIDE LIPASE'''<br />
 
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==Overview==
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==CATALYSIS AT THE INTERFACE: THE ANATOMY OF A CONFORMATIONAL CHANGE IN A TRIGLYCERIDE LIPASE==
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The crystal structure of an extracellular triglyceride lipase (from a, fungus Rhizomucor miehei) inhibited irreversibly by diethyl p-nitrophenyl, phosphate (E600) was solved by X-ray crystallographic methods and refined, to a resolution of 2.65 A. The crystals are isomorphous with those of, n-hexylphosphonate ethyl ester/lipase complex [Brzozowski, A. M., Derewenda, U., Derewenda, Z. S., Dodson, G. G., Lawson, D. M., Turkenburg, J. P., Bjorkling, F., Huge-Jensen, B., Patkar, S. A., &amp; Thim, L. (1991), Nature 351, 491-494], where the conformational change was originally, observed. The higher resolution of the present study allowed for a, detailed analysis of the stereochemistry of the change observed in the, inhibited enzyme. The movement of a 15 amino acid long "lid" (residues, 82-96) is a hinge-type rigid-body motion which transports some of the, atoms of a short alpha-helix (residues 85-91) by over 12 A. There are two, hinge regions (residues 83-84 and 91-95) within which pronounced, transitions of secondary structure between alpha and beta conformations, are caused by dramatic changes of specific conformational dihedral angles, (phi and psi). As a result of this change a hydrophobic area of ca. 800 A2, (8% of the total molecule surface) becomes exposed. Other triglyceride, lipases are also known to have "lids" similar to the one observed in the, R. miehei enzyme, and it is possible that the general stereochemistry of, lipase activation at the oil-water interfaces inferred from the present, X-ray study is likely to apply to the entire family of lipases.
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<StructureSection load='4tgl' size='340' side='right'caption='[[4tgl]], [[Resolution|resolution]] 2.60&Aring;' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[4tgl]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Atcc_16457 Atcc 16457]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4TGL OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4TGL FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=DEP:DIETHYL+PHOSPHONATE'>DEP</scene></td></tr>
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<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Triacylglycerol_lipase Triacylglycerol lipase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.1.1.3 3.1.1.3] </span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4tgl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4tgl OCA], [http://pdbe.org/4tgl PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4tgl RCSB], [http://www.ebi.ac.uk/pdbsum/4tgl PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4tgl ProSAT]</span></td></tr>
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</table>
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/tg/4tgl_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=4tgl ConSurf].
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<div style="clear:both"></div>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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The crystal structure of an extracellular triglyceride lipase (from a fungus Rhizomucor miehei) inhibited irreversibly by diethyl p-nitrophenyl phosphate (E600) was solved by X-ray crystallographic methods and refined to a resolution of 2.65 A. The crystals are isomorphous with those of n-hexylphosphonate ethyl ester/lipase complex [Brzozowski, A. M., Derewenda, U., Derewenda, Z. S., Dodson, G. G., Lawson, D. M., Turkenburg, J. P., Bjorkling, F., Huge-Jensen, B., Patkar, S. A., &amp; Thim, L. (1991) Nature 351, 491-494], where the conformational change was originally observed. The higher resolution of the present study allowed for a detailed analysis of the stereochemistry of the change observed in the inhibited enzyme. The movement of a 15 amino acid long "lid" (residues 82-96) is a hinge-type rigid-body motion which transports some of the atoms of a short alpha-helix (residues 85-91) by over 12 A. There are two hinge regions (residues 83-84 and 91-95) within which pronounced transitions of secondary structure between alpha and beta conformations are caused by dramatic changes of specific conformational dihedral angles (phi and psi). As a result of this change a hydrophobic area of ca. 800 A2 (8% of the total molecule surface) becomes exposed. Other triglyceride lipases are also known to have "lids" similar to the one observed in the R. miehei enzyme, and it is possible that the general stereochemistry of lipase activation at the oil-water interfaces inferred from the present X-ray study is likely to apply to the entire family of lipases.
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==About this Structure==
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Catalysis at the interface: the anatomy of a conformational change in a triglyceride lipase.,Derewenda U, Brzozowski AM, Lawson DM, Derewenda ZS Biochemistry. 1992 Feb 11;31(5):1532-41. PMID:1737010<ref>PMID:1737010</ref>
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4TGL is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/ ] with DEP as [http://en.wikipedia.org/wiki/ligand ligand]. Active as [http://en.wikipedia.org/wiki/Triacylglycerol_lipase Triacylglycerol lipase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.1.1.3 3.1.1.3] Full crystallographic information is available from [http://ispc.weizmann.ac.il/oca-bin/ocashort?id=4TGL OCA].
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==Reference==
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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Catalysis at the interface: the anatomy of a conformational change in a triglyceride lipase., Derewenda U, Brzozowski AM, Lawson DM, Derewenda ZS, Biochemistry. 1992 Feb 11;31(5):1532-41. PMID:[http://ispc.weizmann.ac.il//pmbin/getpm?pmid=1737010 1737010]
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</div>
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[[Category: Single protein]]
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<div class="pdbe-citations 4tgl" style="background-color:#fffaf0;"></div>
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[[Category: Triacylglycerol lipase]]
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[[Category: Brzozowski, A.M.]]
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[[Category: Derewenda, U.]]
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[[Category: Derewenda, Z.S.]]
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[[Category: Lawson, D.]]
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[[Category: DEP]]
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[[Category: hydrolase(carboxylic esterase)]]
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''Page seeded by [http://ispc.weizmann.ac.il/oca OCA ] on Tue Nov 20 19:48:55 2007''
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==See Also==
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*[[Lipase|Lipase]]
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== References ==
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<references/>
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__TOC__
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</StructureSection>
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[[Category: Atcc 16457]]
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[[Category: Large Structures]]
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[[Category: Triacylglycerol lipase]]
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[[Category: Brzozowski, A M]]
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[[Category: Derewenda, U]]
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[[Category: Derewenda, Z S]]
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[[Category: Lawson, D]]

Current revision

CATALYSIS AT THE INTERFACE: THE ANATOMY OF A CONFORMATIONAL CHANGE IN A TRIGLYCERIDE LIPASE

PDB ID 4tgl

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