This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


6ez4

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "6ez4" [edit=sysop:move=sysop])
Current revision (13:25, 10 May 2019) (edit) (undo)
 
(2 intermediate revisions not shown.)
Line 1: Line 1:
-
'''Unreleased structure'''
 
-
The entry 6ez4 is ON HOLD until Paper Publication
+
==NMR structure of the C-terminal domain of the human RPAP3 protein==
 +
<StructureSection load='6ez4' size='340' side='right'caption='[[6ez4]], [[NMR_Ensembles_of_Models | 20 NMR models]]' scene=''>
 +
== Structural highlights ==
 +
<table><tr><td colspan='2'>[[6ez4]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Human Human]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6EZ4 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6EZ4 FirstGlance]. <br>
 +
</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">RPAP3 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN])</td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6ez4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6ez4 OCA], [http://pdbe.org/6ez4 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6ez4 RCSB], [http://www.ebi.ac.uk/pdbsum/6ez4 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6ez4 ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[[http://www.uniprot.org/uniprot/RPAP3_HUMAN RPAP3_HUMAN]] Forms an interface between the RNA polymerase II enzyme and chaperone/scaffolding protein, suggesting that it is required to connect RNA polymerase II to regulators of protein complex formation.<ref>PMID:17643375</ref>
 +
<div style="background-color:#fffaf0;">
 +
== Publication Abstract from PubMed ==
 +
R2TP is an HSP90 co-chaperone that assembles important macro-molecular machineries. It is composed of an RPAP3-PIH1D1 heterodimer, which binds the two essential AAA+ATPases RUVBL1/RUVBL2. Here, we resolve the structure of the conserved C-terminal domain of RPAP3, and we show that it directly binds RUVBL1/RUVBL2 hexamers. The human genome encodes two other proteins bearing RPAP3-C-terminal-like domains and three containing PIH-like domains. Systematic interaction analyses show that one RPAP3-like protein, SPAG1, binds PIH1D2 and RUVBL1/2 to form an R2TP-like complex termed R2SP. This co-chaperone is enriched in testis and among 68 of the potential clients identified, some are expressed in testis and others are ubiquitous. One substrate is liprin-alpha2, which organizes large signaling complexes. Remarkably, R2SP is required for liprin-alpha2 expression and for the assembly of liprin-alpha2 complexes, indicating that R2SP functions in quaternary protein folding. Effects are stronger at 32 degrees C, suggesting that R2SP could help compensating the lower temperate of testis.
-
Authors: Fabre, P., Chagot, M.E., Bragantini, B., Manival, X., Quinternet, M.
+
The RPAP3-Cterminal domain identifies R2TP-like quaternary chaperones.,Maurizy C, Quinternet M, Abel Y, Verheggen C, Santo PE, Bourguet M, C F Paiva A, Bragantini B, Chagot ME, Robert MC, Abeza C, Fabre P, Fort P, Vandermoere F, M F Sousa P, Rain JC, Charpentier B, Cianferani S, Bandeiras TM, Pradet-Balade B, Manival X, Bertrand E Nat Commun. 2018 May 29;9(1):2093. doi: 10.1038/s41467-018-04431-1. PMID:29844425<ref>PMID:29844425</ref>
-
Description: NMR structure of the C-terminal domain of the human RPAP3 protein
+
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
-
[[Category: Unreleased Structures]]
+
</div>
-
[[Category: Manival, X]]
+
<div class="pdbe-citations 6ez4" style="background-color:#fffaf0;"></div>
-
[[Category: Fabre, P]]
+
== References ==
 +
<references/>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Human]]
 +
[[Category: Large Structures]]
[[Category: Bragantini, B]]
[[Category: Bragantini, B]]
-
[[Category: Chagot, M.E]]
+
[[Category: Chagot, M E]]
 +
[[Category: Fabre, P]]
 +
[[Category: Manival, X]]
[[Category: Quinternet, M]]
[[Category: Quinternet, M]]
 +
[[Category: Chaperone]]
 +
[[Category: Pih]]
 +
[[Category: R2tp]]
 +
[[Category: Rna polymerase]]
 +
[[Category: Ruvbl1]]
 +
[[Category: Ruvbl2]]
 +
[[Category: Rvb1]]
 +
[[Category: Rvb2]]
 +
[[Category: Snornp]]

Current revision

NMR structure of the C-terminal domain of the human RPAP3 protein

PDB ID 6ez4

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools