This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
4yvh
From Proteopedia
(Difference between revisions)
| Line 1: | Line 1: | ||
==Crystal Structure of H. influenzae TrmD in complex with sinefungin== | ==Crystal Structure of H. influenzae TrmD in complex with sinefungin== | ||
| - | <StructureSection load='4yvh' size='340' side='right' caption='[[4yvh]], [[Resolution|resolution]] 1.60Å' scene=''> | + | <StructureSection load='4yvh' size='340' side='right'caption='[[4yvh]], [[Resolution|resolution]] 1.60Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[4yvh]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4YVH OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4YVH FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[4yvh]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Haein Haein]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4YVH OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4YVH FirstGlance]. <br> |
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=SFG:SINEFUNGIN'>SFG</scene></td></tr> | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=SFG:SINEFUNGIN'>SFG</scene></td></tr> | ||
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4yvg|4yvg]], [[4yvi|4yvi]], [[4yvj|4yvj]], [[4yvk|4yvk]]</td></tr> | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4yvg|4yvg]], [[4yvi|4yvi]], [[4yvj|4yvj]], [[4yvk|4yvk]]</td></tr> | ||
| + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">trmD, HI_0202 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=71421 HAEIN])</td></tr> | ||
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/tRNA_(guanine(37)-N(1))-methyltransferase tRNA (guanine(37)-N(1))-methyltransferase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.1.1.228 2.1.1.228] </span></td></tr> | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/tRNA_(guanine(37)-N(1))-methyltransferase tRNA (guanine(37)-N(1))-methyltransferase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.1.1.228 2.1.1.228] </span></td></tr> | ||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4yvh FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4yvh OCA], [http://pdbe.org/4yvh PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4yvh RCSB], [http://www.ebi.ac.uk/pdbsum/4yvh PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4yvh ProSAT]</span></td></tr> | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4yvh FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4yvh OCA], [http://pdbe.org/4yvh PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4yvh RCSB], [http://www.ebi.ac.uk/pdbsum/4yvh PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4yvh ProSAT]</span></td></tr> | ||
| Line 27: | Line 28: | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| + | [[Category: Haein]] | ||
| + | [[Category: Large Structures]] | ||
[[Category: Ito, T]] | [[Category: Ito, T]] | ||
[[Category: Yokoyama, S]] | [[Category: Yokoyama, S]] | ||
Revision as of 06:32, 12 June 2019
Crystal Structure of H. influenzae TrmD in complex with sinefungin
| |||||||||||
Categories: Haein | Large Structures | Ito, T | Yokoyama, S | Yoshida, K | Mtase | Spout | Transferase
