This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


4yt6

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 1: Line 1:
==Factor VIIa in complex with the inhibitor 4-{[(R)-[5-ethoxy-2-fluoro-3-(propan-2-yloxy)phenyl](4-phenyl-1H-imidazol-2-yl)methyl]amino}benzenecarboximidamide==
==Factor VIIa in complex with the inhibitor 4-{[(R)-[5-ethoxy-2-fluoro-3-(propan-2-yloxy)phenyl](4-phenyl-1H-imidazol-2-yl)methyl]amino}benzenecarboximidamide==
-
<StructureSection load='4yt6' size='340' side='right' caption='[[4yt6]], [[Resolution|resolution]] 2.07&Aring;' scene=''>
+
<StructureSection load='4yt6' size='340' side='right'caption='[[4yt6]], [[Resolution|resolution]] 2.07&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[4yt6]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4YT6 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4YT6 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[4yt6]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Human Human]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4YT6 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4YT6 FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=4JY:4-[[(R)-(5-ETHOXY-2-FLUORANYL-3-PROPAN-2-YLOXY-PHENYL)-(4-PHENYL-1H-IMIDAZOL-2-YL)METHYL]AMINO]BENZENECARBOXIMIDAMIDE'>4JY</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=4JY:4-[[(R)-(5-ETHOXY-2-FLUORANYL-3-PROPAN-2-YLOXY-PHENYL)-(4-PHENYL-1H-IMIDAZOL-2-YL)METHYL]AMINO]BENZENECARBOXIMIDAMIDE'>4JY</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4yt7|4yt7]]</td></tr>
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4yt7|4yt7]]</td></tr>
 +
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">F7 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN])</td></tr>
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Coagulation_factor_VIIa Coagulation factor VIIa], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.4.21.21 3.4.21.21] </span></td></tr>
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Coagulation_factor_VIIa Coagulation factor VIIa], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.4.21.21 3.4.21.21] </span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4yt6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4yt6 OCA], [http://pdbe.org/4yt6 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4yt6 RCSB], [http://www.ebi.ac.uk/pdbsum/4yt6 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4yt6 ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4yt6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4yt6 OCA], [http://pdbe.org/4yt6 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4yt6 RCSB], [http://www.ebi.ac.uk/pdbsum/4yt6 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4yt6 ProSAT]</span></td></tr>
Line 22: Line 23:
</div>
</div>
<div class="pdbe-citations 4yt6" style="background-color:#fffaf0;"></div>
<div class="pdbe-citations 4yt6" style="background-color:#fffaf0;"></div>
 +
 +
==See Also==
 +
*[[Factor VIIa|Factor VIIa]]
== References ==
== References ==
<references/>
<references/>
Line 27: Line 31:
</StructureSection>
</StructureSection>
[[Category: Coagulation factor VIIa]]
[[Category: Coagulation factor VIIa]]
 +
[[Category: Human]]
 +
[[Category: Large Structures]]
[[Category: Wei, A]]
[[Category: Wei, A]]
[[Category: Blood coagulation factor]]
[[Category: Blood coagulation factor]]

Revision as of 06:48, 12 June 2019

Factor VIIa in complex with the inhibitor 4-{[(R)-[5-ethoxy-2-fluoro-3-(propan-2-yloxy)phenyl](4-phenyl-1H-imidazol-2-yl)methyl]amino}benzenecarboximidamide

PDB ID 4yt6

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools