4zmt

From Proteopedia

(Difference between revisions)

Revision as of 08:25, 26 June 2019

Crystal structure of human P-cadherin (ss-X-dimer-long)

Structural highlights

4zmt is a 6 chain structure with sequence from Human. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Ligands:
Related:	4zml, 4zmn, 4zmo, 4zmp, 4zmq, 4zmv, 4zmw, 4zmx, 4zmy, 4zmz
Gene:	CDH3, CDHP (HUMAN)
Resources:	FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Disease

[CADH3_HUMAN] Hypotrichosis with juvenile macular degeneration;EEM syndrome. The disease is caused by mutations affecting the gene represented in this entry. The disease is caused by mutations affecting the gene represented in this entry.

Function

[CADH3_HUMAN] Cadherins are calcium-dependent cell adhesion proteins. They preferentially interact with themselves in a homophilic manner in connecting cells; cadherins may thus contribute to the sorting of heterogeneous cell types.

Publication Abstract from PubMed

Orderly assembly of classical cadherins governs cell adhesion and tissue maintenance. A key event is the strand-swap dimerization of the extracellular ectodomains of two cadherin molecules from apposing cells. Here we have determined crystal structures of P-cadherin in six different conformational states to elaborate a motion picture of its adhesive dimerization at the atomic level. The snapshots revealed that cell-adhesive dimerization is facilitated by several intermediate states collectively termed X-dimer in analogy to other classical cadherins. Based on previous studies and on the combined structural, kinetic, thermodynamic, biochemical, and cellular data reported herein, we propose that the adhesive dimerization of human P-cadherin is achieved by a stepwise mechanism analogous to that of assembly chaperones. This mechanism, applicable to type I classical cadherins, confers high specificity and fast association rates. We expect these findings to guide innovative therapeutic approaches targeting P-cadherin in cancer.

Adhesive Dimerization of Human P-Cadherin Catalyzed by a Chaperone-like Mechanism.,Kudo S, Caaveiro JM, Tsumoto K Structure. 2016 Sep 6;24(9):1523-1536. doi: 10.1016/j.str.2016.07.002. Epub 2016 , Aug 18. PMID:27545624^[1]

From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.

References

↑ Kudo S, Caaveiro JM, Tsumoto K. Adhesive Dimerization of Human P-Cadherin Catalyzed by a Chaperone-like Mechanism. Structure. 2016 Sep 6;24(9):1523-1536. doi: 10.1016/j.str.2016.07.002. Epub 2016 , Aug 18. PMID:27545624 doi:http://dx.doi.org/10.1016/j.str.2016.07.002

1 Structural highlights
2 Disease
3 Function
4 Publication Abstract from PubMed
5 See Also
6 References

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/4zmt"

@@ Line 1: / Line 1: @@
 ==Crystal structure of human P-cadherin (ss-X-dimer-long)==
-<StructureSection load='4zmt' size='340' side='right' caption='[[4zmt]], [[Resolution|resolution]] 2.70&Aring;' scene=''>
+<StructureSection load='4zmt' size='340' side='right'caption='[[4zmt]], [[Resolution|resolution]] 2.70&Aring;' scene=''>
 == Structural highlights ==
-<table><tr><td colspan='2'>[[4zmt]] is a 6 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4ZMT OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4ZMT FirstGlance]. <br>
+<table><tr><td colspan='2'>[[4zmt]] is a 6 chain structure with sequence from [http://en.wikipedia.org/wiki/Human Human]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4ZMT OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4ZMT FirstGlance]. <br>
 </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene></td></tr>
 <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4zml|4zml]], [[4zmn|4zmn]], [[4zmo|4zmo]], [[4zmp|4zmp]], [[4zmq|4zmq]], [[4zmv|4zmv]], [[4zmw|4zmw]], [[4zmx|4zmx]], [[4zmy|4zmy]], [[4zmz|4zmz]]</td></tr>
+<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">CDH3, CDHP ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN])</td></tr>
 <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4zmt FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4zmt OCA], [http://pdbe.org/4zmt PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4zmt RCSB], [http://www.ebi.ac.uk/pdbsum/4zmt PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4zmt ProSAT]</span></td></tr>
 </table>
@@ Line 21: / Line 22: @@
 </div>
 <div class="pdbe-citations 4zmt" style="background-color:#fffaf0;"></div>
+==See Also==
+*[[Cadherin 3D structures|Cadherin 3D structures]]
 == References ==
 <references/>
 __TOC__
 </StructureSection>
+[[Category: Human]]
+[[Category: Large Structures]]
 [[Category: Caaveiro, J M.M]]
 [[Category: Kudo, S]]

4zmt

From Proteopedia

Revision as of 08:25, 26 June 2019

Crystal structure of human P-cadherin (ss-X-dimer-long)

Structural highlights

Disease

Function

Publication Abstract from PubMed

See Also

References

Contents

Proteopedia Page Contributors and Editors (what is this?)

Views

Personal tools

Navigation

Search

Toolbox