This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
3lmf
From Proteopedia
(Difference between revisions)
| (4 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
| - | {{STRUCTURE_3lmf| PDB=3lmf | SCENE= }} | ||
| - | ===Crystal Structure of Nmul_A1745 protein from Nitrosospira multiformis, Northeast Structural Genomics Consortium Target NmR72=== | ||
| - | == | + | ==Crystal Structure of Nmul_A1745 protein from Nitrosospira multiformis, Northeast Structural Genomics Consortium Target NmR72== |
| - | [[3lmf]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/ | + | <StructureSection load='3lmf' size='340' side='right'caption='[[3lmf]], [[Resolution|resolution]] 2.30Å' scene=''> |
| - | [[Category: | + | == Structural highlights == |
| - | [[Category: Acton, T B | + | <table><tr><td colspan='2'>[[3lmf]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Nitmu Nitmu]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3LMF OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3LMF FirstGlance]. <br> |
| - | [[Category: Ciccosanti, C | + | </td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> |
| - | [[Category: Everett, J K | + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">Nmul_A1745 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=323848 NITMU])</td></tr> |
| - | [[Category: Forouhar, F | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3lmf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3lmf OCA], [http://pdbe.org/3lmf PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3lmf RCSB], [http://www.ebi.ac.uk/pdbsum/3lmf PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3lmf ProSAT]</span></td></tr> |
| - | [[Category: Hunt, J F | + | </table> |
| - | [[Category: Lee, D | + | == Evolutionary Conservation == |
| - | [[Category: Lew, S | + | [[Image:Consurf_key_small.gif|200px|right]] |
| - | [[Category: Montelione, G T | + | Check<jmol> |
| - | [[Category: | + | <jmolCheckbox> |
| - | [[Category: Nair, R | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/lm/3lmf_consurf.spt"</scriptWhenChecked> |
| - | [[Category: Rost, B | + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> |
| - | [[Category: Sahdev, S | + | <text>to colour the structure by Evolutionary Conservation</text> |
| - | [[Category: Seetharaman, J | + | </jmolCheckbox> |
| - | [[Category: Tong, L | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3lmf ConSurf]. |
| - | [[Category: Xiao, R | + | <div style="clear:both"></div> |
| + | __TOC__ | ||
| + | </StructureSection> | ||
| + | [[Category: Large Structures]] | ||
| + | [[Category: Nitmu]] | ||
| + | [[Category: Acton, T B]] | ||
| + | [[Category: Ciccosanti, C]] | ||
| + | [[Category: Everett, J K]] | ||
| + | [[Category: Forouhar, F]] | ||
| + | [[Category: Hunt, J F]] | ||
| + | [[Category: Lee, D]] | ||
| + | [[Category: Lew, S]] | ||
| + | [[Category: Montelione, G T]] | ||
| + | [[Category: Structural genomic]] | ||
| + | [[Category: Nair, R]] | ||
| + | [[Category: Rost, B]] | ||
| + | [[Category: Sahdev, S]] | ||
| + | [[Category: Seetharaman, J]] | ||
| + | [[Category: Tong, L]] | ||
| + | [[Category: Xiao, R]] | ||
[[Category: All alpha-helical protein]] | [[Category: All alpha-helical protein]] | ||
[[Category: Nesg]] | [[Category: Nesg]] | ||
| - | [[Category: | + | [[Category: PSI, Protein structure initiative]] |
| - | + | ||
| - | + | ||
| - | + | ||
[[Category: Unknown function]] | [[Category: Unknown function]] | ||
Current revision
Crystal Structure of Nmul_A1745 protein from Nitrosospira multiformis, Northeast Structural Genomics Consortium Target NmR72
| |||||||||||
Categories: Large Structures | Nitmu | Acton, T B | Ciccosanti, C | Everett, J K | Forouhar, F | Hunt, J F | Lee, D | Lew, S | Montelione, G T | Structural genomic | Nair, R | Rost, B | Sahdev, S | Seetharaman, J | Tong, L | Xiao, R | All alpha-helical protein | Nesg | PSI, Protein structure initiative | Unknown function
