This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1e4y

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 1: Line 1:
==Mutant P9L of adenylate kinase from E. coli, modified in the Gly-loop==
==Mutant P9L of adenylate kinase from E. coli, modified in the Gly-loop==
-
<StructureSection load='1e4y' size='340' side='right' caption='[[1e4y]], [[Resolution|resolution]] 1.85&Aring;' scene=''>
+
<StructureSection load='1e4y' size='340' side='right'caption='[[1e4y]], [[Resolution|resolution]] 1.85&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[1e4y]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1E4Y OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1E4Y FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[1e4y]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/"bacillus_coli"_migula_1895 "bacillus coli" migula 1895]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1E4Y OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1E4Y FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=AP5:BIS(ADENOSINE)-5-PENTAPHOSPHATE'>AP5</scene></td></tr>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=AP5:BIS(ADENOSINE)-5-PENTAPHOSPHATE'>AP5</scene></td></tr>
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4ake|4ake]], [[2eck|2eck]], [[1ake|1ake]], [[1ank|1ank]], [[1e4v|1e4v]]</td></tr>
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4ake|4ake]], [[2eck|2eck]], [[1ake|1ake]], [[1ank|1ank]], [[1e4v|1e4v]]</td></tr>
 +
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">adk, dnaW, plsA, b0474, JW0463 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=562 "Bacillus coli" Migula 1895])</td></tr>
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Adenylate_kinase Adenylate kinase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.4.3 2.7.4.3] </span></td></tr>
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Adenylate_kinase Adenylate kinase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.4.3 2.7.4.3] </span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1e4y FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1e4y OCA], [http://pdbe.org/1e4y PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1e4y RCSB], [http://www.ebi.ac.uk/pdbsum/1e4y PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1e4y ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1e4y FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1e4y OCA], [http://pdbe.org/1e4y PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1e4y RCSB], [http://www.ebi.ac.uk/pdbsum/1e4y PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1e4y ProSAT]</span></td></tr>
Line 15: Line 16:
Check<jmol>
Check<jmol>
<jmolCheckbox>
<jmolCheckbox>
-
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/e4/1e4y_consurf.spt"</scriptWhenChecked>
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/e4/1e4y_consurf.spt"</scriptWhenChecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
Line 30: Line 31:
</div>
</div>
<div class="pdbe-citations 1e4y" style="background-color:#fffaf0;"></div>
<div class="pdbe-citations 1e4y" style="background-color:#fffaf0;"></div>
 +
 +
==See Also==
 +
*[[Adenylate kinase 3D structures|Adenylate kinase 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
 +
[[Category: Bacillus coli migula 1895]]
[[Category: Adenylate kinase]]
[[Category: Adenylate kinase]]
-
[[Category: Escherichia coli]]
+
[[Category: Large Structures]]
[[Category: Mueller, C W]]
[[Category: Mueller, C W]]
[[Category: Schulz, G E]]
[[Category: Schulz, G E]]

Revision as of 07:29, 21 August 2019

Mutant P9L of adenylate kinase from E. coli, modified in the Gly-loop

PDB ID 1e4y

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools