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6hbz
From Proteopedia
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| - | '''Unreleased structure''' | ||
| - | + | ==Bdellovibrio bacteriovorus DgcB Full-length== | |
| + | <StructureSection load='6hbz' size='340' side='right'caption='[[6hbz]], [[Resolution|resolution]] 1.79Å' scene=''> | ||
| + | == Structural highlights == | ||
| + | <table><tr><td colspan='2'>[[6hbz]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Bdeba Bdeba]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6HBZ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6HBZ FirstGlance]. <br> | ||
| + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=C2E:9,9-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d 3,2-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one)'>C2E</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene></td></tr> | ||
| + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">Bd0742 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=264462 BDEBA])</td></tr> | ||
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6hbz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6hbz OCA], [http://pdbe.org/6hbz PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6hbz RCSB], [http://www.ebi.ac.uk/pdbsum/6hbz PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6hbz ProSAT]</span></td></tr> | ||
| + | </table> | ||
| + | <div style="background-color:#fffaf0;"> | ||
| + | == Publication Abstract from PubMed == | ||
| + | The bacterial second messenger cyclic-di-GMP is a widespread, prominent effector of lifestyle change. An example of this occurs in the predatory bacterium Bdellovibrio bacteriovorus, which cycles between free-living and intraperiplasmic phases after entering (and killing) another bacterium. The initiation of prey invasion is governed by DgcB (GGDEF enzyme) that produces cyclic-di-GMP in response to an unknown stimulus. Here, we report the structure of DgcB, and demonstrate that the GGDEF and sensory forkhead-associated (FHA) domains form an asymmetric dimer. Our structures indicate that the FHA domain is a consensus phosphopeptide sensor, and that the ligand for activation is surprisingly derived from the N-terminal region of DgcB itself. We confirm this hypothesis by determining the structure of a FHA:phosphopeptide complex, from which we design a constitutively-active mutant (confirmed via enzyme assays). Our results provide an understanding of the stimulus driving DgcB-mediated prey invasion and detail a unique mechanism of GGDEF enzyme regulation. | ||
| - | + | Structural basis for activation of a diguanylate cyclase required for bacterial predation in Bdellovibrio.,Meek RW, Cadby IT, Moynihan PJ, Lovering AL Nat Commun. 2019 Sep 9;10(1):4086. doi: 10.1038/s41467-019-12051-6. PMID:31501441<ref>PMID:31501441</ref> | |
| - | + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | |
| - | [[Category: | + | </div> |
| - | [[Category: Lovering, A | + | <div class="pdbe-citations 6hbz" style="background-color:#fffaf0;"></div> |
| - | [[Category: Meek, R | + | == References == |
| + | <references/> | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
| + | [[Category: Bdeba]] | ||
| + | [[Category: Large Structures]] | ||
| + | [[Category: Lovering, A L]] | ||
| + | [[Category: Meek, R W]] | ||
| + | [[Category: C-di-gmp]] | ||
| + | [[Category: Diguanylate cyclase]] | ||
| + | [[Category: Fha]] | ||
| + | [[Category: Ggdef]] | ||
| + | [[Category: Signaling protein]] | ||
Current revision
Bdellovibrio bacteriovorus DgcB Full-length
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