This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


5v6s

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 1: Line 1:
==Crystal structure of small molecule acrylamide 1 covalently bound to K-Ras G12C==
==Crystal structure of small molecule acrylamide 1 covalently bound to K-Ras G12C==
-
<StructureSection load='5v6s' size='340' side='right' caption='[[5v6s]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
+
<StructureSection load='5v6s' size='340' side='right'caption='[[5v6s]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[5v6s]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5V6S OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5V6S FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[5v6s]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Human Human]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5V6S OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5V6S FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=8YD:1-{4-[6-chloro-8-fluoro-7-(5-methyl-1H-indazol-4-yl)quinazolin-4-yl]piperazin-1-yl}propan-1-one'>8YD</scene>, <scene name='pdbligand=GDP:GUANOSINE-5-DIPHOSPHATE'>GDP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=8YD:1-{4-[6-chloro-8-fluoro-7-(5-methyl-1H-indazol-4-yl)quinazolin-4-yl]piperazin-1-yl}propan-1-one'>8YD</scene>, <scene name='pdbligand=GDP:GUANOSINE-5-DIPHOSPHATE'>GDP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[5v6v|5v6v]]</td></tr>
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[5v6v|5v6v]]</td></tr>
 +
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">KRAS, KRAS2, RASK2 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN])</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5v6s FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5v6s OCA], [http://pdbe.org/5v6s PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5v6s RCSB], [http://www.ebi.ac.uk/pdbsum/5v6s PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5v6s ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5v6s FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5v6s OCA], [http://pdbe.org/5v6s PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5v6s RCSB], [http://www.ebi.ac.uk/pdbsum/5v6s PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5v6s ProSAT]</span></td></tr>
</table>
</table>
Line 21: Line 22:
</div>
</div>
<div class="pdbe-citations 5v6s" style="background-color:#fffaf0;"></div>
<div class="pdbe-citations 5v6s" style="background-color:#fffaf0;"></div>
 +
 +
==See Also==
 +
*[[GTPase KRas 3D structures|GTPase KRas 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
 +
[[Category: Human]]
 +
[[Category: Large Structures]]
[[Category: Burke, J E]]
[[Category: Burke, J E]]
[[Category: Jenkins, M]]
[[Category: Jenkins, M]]

Revision as of 16:53, 20 November 2019

Crystal structure of small molecule acrylamide 1 covalently bound to K-Ras G12C

PDB ID 5v6s

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools