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6j2f

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(New page: '''Unreleased structure''' The entry 6j2f is ON HOLD Authors: Lu, D., Liu, K.F., Yue, C., Lu, Q., Cheng, H., Chai, Y., Qi, J.X., Gao, G.F., Liu, W.J. Description: Crystal structure of ...)
Current revision (10:18, 4 December 2019) (edit) (undo)
 
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'''Unreleased structure'''
 
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The entry 6j2f is ON HOLD
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==Crystal structure of bat (Pteropus Alecto) MHC class I Ptal-N*01:01 in complex with Hendra virus-derived peptide HeV2==
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<StructureSection load='6j2f' size='340' side='right'caption='[[6j2f]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[6j2f]] is a 6 chain structure with sequence from [http://en.wikipedia.org/wiki/Black_flying_fox Black flying fox]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6J2F OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6J2F FirstGlance]. <br>
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</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">Ptal-N ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9402 Black flying fox]), PAL_GLEAN10023531 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9402 Black flying fox])</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6j2f FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6j2f OCA], [http://pdbe.org/6j2f PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6j2f RCSB], [http://www.ebi.ac.uk/pdbsum/6j2f PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6j2f ProSAT]</span></td></tr>
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</table>
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== Function ==
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[[http://www.uniprot.org/uniprot/L5K3Y9_PTEAL L5K3Y9_PTEAL]] Component of the class I major histocompatibility complex (MHC). Involved in the presentation of peptide antigens to the immune system.[SAAS:SAAS00359208]
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Bats harbor many zoonotic viruses, including highly pathogenic viruses of humans and other mammals, but they are typically asymptomatic in bats. To further understand the antiviral immunity of bats, we screened and identified a series of bat major histocompatibility complex (MHC) I Ptal-N*01:01-binding peptides derived from four different bat-borne viruses, i.e., Hendra virus (HeV), Ebola virus (EBOV), Middle East respiratory syndrome coronavirus (MERS-CoV), and H17N10 influenza-like virus. The structures of Ptal-N*01:01 display unusual peptide presentation features in that the bat-specific 3-amino acid (aa) insertion enables the tight "surface anchoring" of the P1-Asp in pocket A of bat MHC I. As the classical primary anchoring positions, the B and F pockets of Ptal-N*01:01 also show unconventional conformations, which contribute to unusual peptide motifs and distinct peptide presentation. Notably, the features of bat MHC I may be shared by MHC I from various marsupials. Our study sheds light on bat adaptive immunity and may benefit future vaccine development against bat-borne viruses of high impact on humans.
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Authors: Lu, D., Liu, K.F., Yue, C., Lu, Q., Cheng, H., Chai, Y., Qi, J.X., Gao, G.F., Liu, W.J.
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Peptide presentation by bat MHC class I provides new insight into the antiviral immunity of bats.,Lu D, Liu K, Zhang D, Yue C, Lu Q, Cheng H, Wang L, Chai Y, Qi J, Wang LF, Gao GF, Liu WJ PLoS Biol. 2019 Sep 9;17(9):e3000436. doi: 10.1371/journal.pbio.3000436., eCollection 2019 Sep. PMID:31498797<ref>PMID:31498797</ref>
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Description: Crystal structure of Major Histocompatibility Complex, class I, presenting peptide 1
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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[[Category: Unreleased Structures]]
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</div>
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[[Category: Qi, J.X]]
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<div class="pdbe-citations 6j2f" style="background-color:#fffaf0;"></div>
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[[Category: Liu, W.J]]
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== References ==
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[[Category: Gao, G.F]]
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<references/>
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[[Category: Yue, C]]
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__TOC__
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[[Category: Lu, D]]
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</StructureSection>
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[[Category: Black flying fox]]
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[[Category: Large Structures]]
[[Category: Chai, Y]]
[[Category: Chai, Y]]
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[[Category: Lu, Q]]
 
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[[Category: Liu, K.F]]
 
[[Category: Cheng, H]]
[[Category: Cheng, H]]
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[[Category: Gao, G F]]
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[[Category: Liu, K F]]
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[[Category: Liu, W J]]
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[[Category: Lu, D]]
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[[Category: Lu, Q]]
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[[Category: Qi, J X]]
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[[Category: Yue, C]]
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[[Category: Immune system]]

Current revision

Crystal structure of bat (Pteropus Alecto) MHC class I Ptal-N*01:01 in complex with Hendra virus-derived peptide HeV2

PDB ID 6j2f

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