6v1s

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 1: Line 1:
-
'''Unreleased structure'''
 
-
The entry 6v1s is ON HOLD until Paper Publication
+
==Structure of the Clostridioides difficile transferase toxin==
 +
<StructureSection load='6v1s' size='340' side='right'caption='[[6v1s]], [[Resolution|resolution]] 3.80&Aring;' scene=''>
 +
== Structural highlights ==
 +
<table><tr><td colspan='2'>[[6v1s]] is a 8 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6V1S OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6V1S FirstGlance]. <br>
 +
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene></td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6v1s FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6v1s OCA], [http://pdbe.org/6v1s PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6v1s RCSB], [http://www.ebi.ac.uk/pdbsum/6v1s PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6v1s ProSAT]</span></td></tr>
 +
</table>
 +
<div style="background-color:#fffaf0;">
 +
== Publication Abstract from PubMed ==
 +
Clostridioides difficile is a Gram-positive, pathogenic bacterium and a prominent cause of hospital-acquired diarrhea in the United States. The symptoms of C. difficile infection are caused by the activity of three large toxins known as toxin A (TcdA), toxin B (TcdB), and the C. difficile transferase toxin (CDT). Reported here is a 3.8-A cryo-electron microscopy (cryo-EM) structure of CDT, a bipartite toxin comprised of the proteins CDTa and CDTb. We observe a single molecule of CDTa bound to a CDTb heptamer. The formation of the CDT complex relies on the interaction of an N-terminal adaptor and pseudoenzyme domain of CDTa with six subunits of the CDTb heptamer. CDTb is observed in a preinsertion state, a conformation observed in the transition of prepore to beta-barrel pore, although we also observe a single bound CDTa in the prepore and beta-barrel conformations of CDTb. The binding interaction appears to prime CDTa for translocation as the adaptor subdomain enters the lumen of the preinsertion state channel. These structural observations advance the understanding of how a single protein, CDTb, can mediate the delivery of a large enzyme, CDTa, into the cytosol of mammalian cells.
-
Authors:
+
Structural elucidation of the Clostridioides difficile transferase toxin reveals a single-site binding mode for the enzyme.,Sheedlo MJ, Anderson DM, Thomas AK, Lacy DB Proc Natl Acad Sci U S A. 2020 Mar 2. pii: 1920555117. doi:, 10.1073/pnas.1920555117. PMID:32123082<ref>PMID:32123082</ref>
-
Description:
+
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
-
[[Category: Unreleased Structures]]
+
</div>
 +
<div class="pdbe-citations 6v1s" style="background-color:#fffaf0;"></div>
 +
== References ==
 +
<references/>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Large Structures]]
 +
[[Category: Anderson, D M]]
 +
[[Category: Lacy, D B]]
 +
[[Category: Sheedlo, M J]]
 +
[[Category: Thomas, A K]]
 +
[[Category: Binary]]
 +
[[Category: Cdt]]
 +
[[Category: Clostridioide]]
 +
[[Category: Clostridium]]
 +
[[Category: Iota]]
 +
[[Category: Toxin]]
 +
[[Category: Translocase]]

Revision as of 09:59, 18 March 2020

Structure of the Clostridioides difficile transferase toxin

PDB ID 6v1s

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools