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6ovm

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'''Unreleased structure'''
 
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The entry 6ovm is ON HOLD
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==Crystal Structure of the Pseudomonas capeferrum Anti-sigma Regulator PupR C-terminal Cell-surface Signaling Domain in Complex with the Outer Membrane Transporter PupB N-terminal Signaling Domain (SeMet)==
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<StructureSection load='6ovm' size='340' side='right'caption='[[6ovm]], [[Resolution|resolution]] 1.60&Aring;' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[6ovm]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/"pseudomonas_capeferrum"_berendsen_et_al._2015 "pseudomonas capeferrum" berendsen et al. 2015]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6OVM OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=6OVM FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=TLA:L(+)-TARTARIC+ACID'>TLA</scene></td></tr>
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<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">PC358_08100, pupR ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1495066 "Pseudomonas capeferrum" Berendsen et al. 2015]), PC358_08105, pupB ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1495066 "Pseudomonas capeferrum" Berendsen et al. 2015])</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=6ovm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6ovm OCA], [http://pdbe.org/6ovm PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6ovm RCSB], [http://www.ebi.ac.uk/pdbsum/6ovm PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6ovm ProSAT]</span></td></tr>
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</table>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Cell-surface signaling (CSS) in Gram-negative bacteria involves highly conserved regulatory pathways that optimize gene expression by transducing extracellular environmental signals to the cytoplasm via inner-membrane sigma regulators. The molecular details of ferric siderophore-mediated activation of the iron import machinery through a sigma regulator are unclear. Here, we present the 1.56 A resolution structure of the periplasmic complex of the C-terminal CSS domain (CCSSD) of PupR, the sigma regulator in the Pseudomonas capeferrum pseudobactin BN7/8 transport system, and the N-terminal signaling domain (NTSD) of PupB, an outer-membrane TonB-dependent transducer. The structure revealed that the CCSSD consists of two subdomains: a juxta-membrane subdomain, which has a novel all-beta fold, followed by a secretin/TonB, short N-terminal subdomain at the C-terminus of the CCSSD, a previously unobserved topological arrangement of this domain. Using affinity pull-down assays, isothermal titration calorimetry, and thermal denaturation circular dichroism spectroscopy; we show that both subdomains are required for binding the NTSD with micromolar affinity and that NTSD binding improves CCSSD stability. Our findings prompt us to present a revised model of CSS wherein the CCSSD:NTSD complex forms prior to ferric-siderophore binding. Upon siderophore binding, conformational changes in the CCSSD enable regulated intramembrane proteolysis of the sigma regulator, ultimately resulting in transcriptional regulation.
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Authors:
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Structural basis of cell surface signaling by a conserved sigma regulator in Gram-negative bacteria.,Jensen JL, Jernberg BD, Sinha S, Colbert CL J Biol Chem. 2020 Feb 26. pii: RA119.010697. doi: 10.1074/jbc.RA119.010697. PMID:32107313<ref>PMID:32107313</ref>
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Description:
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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[[Category: Unreleased Structures]]
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</div>
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<div class="pdbe-citations 6ovm" style="background-color:#fffaf0;"></div>
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== References ==
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<references/>
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__TOC__
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</StructureSection>
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[[Category: Pseudomonas capeferrum berendsen et al. 2015]]
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[[Category: Large Structures]]
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[[Category: Colbert, C L]]
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[[Category: Jensen, J L]]
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[[Category: Iron transport regulation]]
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[[Category: Periplasmic protein]]
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[[Category: Signaling protein]]
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[[Category: Transcriptional regulation]]

Current revision

Crystal Structure of the Pseudomonas capeferrum Anti-sigma Regulator PupR C-terminal Cell-surface Signaling Domain in Complex with the Outer Membrane Transporter PupB N-terminal Signaling Domain (SeMet)

PDB ID 6ovm

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