This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
6lcr
From Proteopedia
(Difference between revisions)
| Line 1: | Line 1: | ||
==Cryo-EM structure of Dnf1 from Chaetomium thermophilum in the E1-ATP state== | ==Cryo-EM structure of Dnf1 from Chaetomium thermophilum in the E1-ATP state== | ||
| - | <StructureSection load='6lcr' size='340' side='right'caption='[[6lcr]]' scene=''> | + | <StructureSection load='6lcr' size='340' side='right'caption='[[6lcr]], [[Resolution|resolution]] 3.40Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6LCR OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=6LCR FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[6lcr]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Chatd Chatd]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6LCR OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=6LCR FirstGlance]. <br> |
| - | </td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=6lcr FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6lcr OCA], [http://pdbe.org/6lcr PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6lcr RCSB], [http://www.ebi.ac.uk/pdbsum/6lcr PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6lcr ProSAT]</span></td></tr> | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACP:PHOSPHOMETHYLPHOSPHONIC+ACID+ADENYLATE+ESTER'>ACP</scene>, <scene name='pdbligand=BMA:BETA-D-MANNOSE'>BMA</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=P5S:O-[(R)-{[(2R)-2,3-BIS(OCTADECANOYLOXY)PROPYL]OXY}(HYDROXY)PHOSPHORYL]-L-SERINE'>P5S</scene></td></tr> |
| + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">CTHT_0012810 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=759272 CHATD]), CTHT_0052360 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=759272 CHATD])</td></tr> | ||
| + | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/P-type_phospholipid_transporter P-type phospholipid transporter], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=7.6.2.1 7.6.2.1] </span></td></tr> | ||
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=6lcr FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6lcr OCA], [http://pdbe.org/6lcr PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6lcr RCSB], [http://www.ebi.ac.uk/pdbsum/6lcr PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6lcr ProSAT]</span></td></tr> | ||
</table> | </table> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| + | [[Category: Chatd]] | ||
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
| - | [[Category: He Y]] | + | [[Category: P-type phospholipid transporter]] |
| - | [[Category: Li L]] | + | [[Category: He, Y]] |
| - | [[Category: Wu X]] | + | [[Category: Li, L]] |
| - | [[Category: Xu J]] | + | [[Category: Wu, X]] |
| + | [[Category: Xu, J]] | ||
| + | [[Category: Lipid flippase]] | ||
| + | [[Category: Lipid transport]] | ||
| + | [[Category: P-type atpase]] | ||
Current revision
Cryo-EM structure of Dnf1 from Chaetomium thermophilum in the E1-ATP state
| |||||||||||
