User:Isabela Fonseca de Oliveira Granha/Sandbox 1

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TCF transcription factors works as the principal nuclear member of ß-catenin multimeric complex. TCFs bind to DNA enhancers and ß-catenin acts as a link in a chain between them and others transcriptional coactivators. This interaction can be modulated to enhance, repress os switch off ß-catenin-mediated transcription. The majority of these transcription coactivators binds to <scene name='84/848919/R12andhelix-c/1'>the last ARM repeat and interacts with Helix-C</scene> and many of them can affect chromatin structure. Indeed, it seems that the C-terminus region of ß-catenin coordinates the recruitment and sequential exchange of these proteins. Binding of ß-catenin to TCF is blocked by some proteins such as <scene name='84/848919/Icat_bcat/3'>ICAT, which interacts with the central ARM repeat of ß-catenin</scene> (here ICAT is represented in orange and is a full length structure from ''Homo sapiens''; ß-catenin is shown in green and is from ''Mus musculus''). ([http://www.rcsb.org/structure/1M1E 1M1E]) <ref name="valenta2012" />
TCF transcription factors works as the principal nuclear member of ß-catenin multimeric complex. TCFs bind to DNA enhancers and ß-catenin acts as a link in a chain between them and others transcriptional coactivators. This interaction can be modulated to enhance, repress os switch off ß-catenin-mediated transcription. The majority of these transcription coactivators binds to <scene name='84/848919/R12andhelix-c/1'>the last ARM repeat and interacts with Helix-C</scene> and many of them can affect chromatin structure. Indeed, it seems that the C-terminus region of ß-catenin coordinates the recruitment and sequential exchange of these proteins. Binding of ß-catenin to TCF is blocked by some proteins such as <scene name='84/848919/Icat_bcat/3'>ICAT, which interacts with the central ARM repeat of ß-catenin</scene> (here ICAT is represented in orange and is a full length structure from ''Homo sapiens''; ß-catenin is shown in green and is from ''Mus musculus''). ([http://www.rcsb.org/structure/1M1E 1M1E]) <ref name="valenta2012" />
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This interaction can be divided in two regions: the <scene name='84/848919/Extendedregionicat_bcat_5_10/1'>ICAT extended C-terminal region bind to the ß-catenin ARM 5-10</scene> and the <scene name='84/848919/Helicalicatdomain_bcat11_12/2'>ICAT helical N-terminal domain interacts with the ARM repeat 11 and 12</scene>. The first one overlaps with others ß-catenin ligands and is known for its several hydrophobic interactions and <scene name='84/848919/2saltbridge_icat_bcat/1'> two salt bridges </scene> - Asp66 and Glu75 form salt bridges with ß-catenin residues Lys435 (repeat 8) and Lys312 (repeat 5). The conserved acids are further stabilized by other polar contacts: ICAT Asp66 binds to ß-catenin Arg474 (repeat 9), and ICAT Glu75 binds to the backbone amide of ß-catenin Gly307 (repeat 5). Finally, the interaction between the ICAT helical domain and the two last ARM repeat is mediated by water contact (with ARM 11) and hydrophobic interactions (ARM 12). The hydrophobic interaction is stabilized by the connections between the aliphatic portion of the Lys19 side chain and the aromatic rings of Phe660 (ARM 12) and Phe40 (ICAT). . Lys19 also forms a salt bridge with -catenin Glu664 (repeat 12). Another polar interaction occurs between ICAT Glu37 and -catenin Arg661.
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This interaction can be divided in two regions: the <scene name='84/848919/Extendedregionicat_bcat_5_10/1'>ICAT extended C-terminal region bind to the ß-catenin ARM 5-10</scene> and the <scene name='84/848919/Helicalicatdomain_bcat11_12/2'>ICAT helical N-terminal domain interacts with the ARM repeat 11 and 12</scene>. The first one overlaps with others ß-catenin ligands and is known for its several <scene name='84/848919/Hydrophobic_icat_bcat/1'>hydrophobic interactions</scene> (for example, Val68, Met69, and Phe71 interact with hydrophobic sites on the surface of ß-catenin) and <scene name='84/848919/2saltbridge_icat_bcat/1'> two salt bridges </scene> - Asp66 and Glu75 form salt bridges with ß-catenin residues Lys435 (repeat 8) and Lys312 (repeat 5). There are other polar contacts to stabilize the protein-protein binding. Finally, the interaction between the ICAT helical domain and the two last ARM repeat is water-mediated contact (with ARM 11) and hydrophobic interactions (ARM 12). The hydrophobic interactions are stabilized by the connections between the aliphatic portion of the <scene name='84/848919/Hydrophbic_lys19_icat_bcat/1'>Lys19 side chain and the aromatic rings of Phe660 (ARM 12) and Phe40 (ICAT)</scene>. Lys19 also forms a <scene name='84/848919/Salt_bridge_lys19_icat_bcat/1'>salt bridge</scene> with ß-catenin Glu664 (repeat 12). Another polar interaction occurs between <scene name='84/848919/Arg_glu_icat_bcat/1'>ICAT Glu37 and ß-catenin Arg661</scene>.
[[Image:Canonical Wnt pathway with Wnt..jpg]]
[[Image:Canonical Wnt pathway with Wnt..jpg]]

Revision as of 17:12, 9 July 2020

ß-catenin

ß-catenin is an important element in cell-cell adherens junctions, called cadherins. Reported in all Eukaryota (Eukaryota) phylum, in humans the gene CTNNB1 (CTNNB1) transcribes a 95kDa protein that allows cadherins to anchor in cytoeskeleton (actin filaments) by connecting cytoplasmic proteins. Besides that, it is an essential regulator of the canonical Wnt pathway [1] (related to embryonic development). Disturbance of this activity is associated with cancer and other diseases. Therefore, ß-catenin is an important target for developing medication for many diseases, with considerable interest in its structure. [2]

Structure of ß-catenin from Zebrafish

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

Isabela Fonseca de Oliveira Granha

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