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Elongation factor 3D structures

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Line 16: Line 16:
**[[1b23]] - TaEF + Cys-tRNA<BR />
**[[1b23]] - TaEF + Cys-tRNA<BR />
**[[3wxm]] – ApEF + plethora protein – ''Aeropyrum pernix''<br />
**[[3wxm]] – ApEF + plethora protein – ''Aeropyrum pernix''<br />
 +
**[[6ji2]] - ApEF + plethora protein + AP2<br />
**[[4h9g]], [[4lbv]], [[4lbw]], [[4lby]], [[4lbz]], [[4lc0]] – TtEF – ''Thermus thermophilus''<br />
**[[4h9g]], [[4lbv]], [[4lbw]], [[4lby]], [[4lbz]], [[4lc0]] – TtEF – ''Thermus thermophilus''<br />
**[[4j0q]] – PpEF – ''Pseudomonas putida''<br />
**[[4j0q]] – PpEF – ''Pseudomonas putida''<br />
**[[5w75]] – EF – ''Thermotoga neapolitana''<br />
**[[5w75]] – EF – ''Thermotoga neapolitana''<br />
**[[5tbf]] – EF domain 2-3– ''Vibrio cholerae''<br />
**[[5tbf]] – EF domain 2-3– ''Vibrio cholerae''<br />
 +
**[[6htw]], [[6i8r]] – EF – synthetic<br />
*''EF-Tu complex with antibiotics''
*''EF-Tu complex with antibiotics''
Line 146: Line 148:
**[[1yby]] – EF – ''Clostridium thermocellum''<br />
**[[1yby]] – EF – ''Clostridium thermocellum''<br />
**[[5j3b]] – AbEF <br />
**[[5j3b]] – AbEF <br />
 +
**[[6rji]] – SaEF <br />
 +
**[[6rk3]] – SaEF - NMR<br />
 +
**[[6s8z]] – EF – ''Corynebacterium glutamicum'' <br />
**[[5wxk]] – EF + EARP – ''Neisseria meningitidis''<br />
**[[5wxk]] – EF + EARP – ''Neisseria meningitidis''<br />
Line 166: Line 171:
**[[5bmu]] – hEF ε-1 + Glu tRNA ligase <br />
**[[5bmu]] – hEF ε-1 + Glu tRNA ligase <br />
**[[5y6l]] – hEF ε-1 (mutant) + MetRS + AspRS + Glu/Pro tRNA ligase + P38<br />
**[[5y6l]] – hEF ε-1 (mutant) + MetRS + AspRS + Glu/Pro tRNA ligase + P38<br />
-
**[[4c0s]] – rEF α-2 – rabbit<br />
+
**[[4c0s]], [[6ra9]] – rEF α-2 – rabbit<br />
**[[5o8w]] – yEF α+β <br />
**[[5o8w]] – yEF α+β <br />
**[[1nhy]] – yEF γ N terminal<br />
**[[1nhy]] – yEF γ N terminal<br />
Line 183: Line 188:
**[[5h7l]] - PhEF + L12<BR />
**[[5h7l]] - PhEF + L12<BR />
**[[5h7k]] - PhEF + GDP<BR />
**[[5h7k]] - PhEF + GDP<BR />
 +
**[[6u45]] – MnEF + GMPPCP – ''Methanoperedens nitroreducens'' <BR />
 +
**[[6u43]], [[6u44]] – MnEF (mutant) + GMPPCP <BR />
*EF-3
*EF-3
Line 213: Line 220:
**[[3h7h]] – hEF-Spt4 residues 2-117 + hEF-Spt5 residues 176-273<br />
**[[3h7h]] – hEF-Spt4 residues 2-117 + hEF-Spt5 residues 176-273<br />
 +
**[[6gmh]], [[6gml]] – hEF-Spt4 + EF-Spt5 + EF-Spt6 in transcription complex – Cryo EM<br />
**[[5oik]] – bEF-Spt4 + EF-Spt5 + RNA polymerase II <br />
**[[5oik]] – bEF-Spt4 + EF-Spt5 + RNA polymerase II <br />
**[[2exu]] – yEF-Spt4 residues 1-99 + EF-Spt5 residues 285-375<br />
**[[2exu]] – yEF-Spt4 residues 1-99 + EF-Spt5 residues 285-375<br />
**[[4zn3]], [[4zn1]] – EF-Spt4 + EF-Spt5 – ''Methanocaldococcus jannaschii'' <br />
**[[4zn3]], [[4zn1]] – EF-Spt4 + EF-Spt5 – ''Methanocaldococcus jannaschii'' <br />
-
**[[5xon]], [[5xog]] – EF-Spt4 + EF-Spt5 + EF-Tfiis + RNA polymerase II - ''Komagataella phaffii'' - Cryo EM<br />
+
**[[5xon]], [[5xog]], [[6ir9]], [[6j4w]], [[6j4x]], [[6j4y]], [[6j4z]], [[6j50]], [[6j51]] – EF-Spt4 + EF-Spt5 + EF-Tfiis in RNA polymerase II elongation complex - ''Komagataella phaffii'' - Cryo EM<br />
*EF-Spt5
*EF-Spt5
Line 236: Line 244:
**[[4z2n]] – hEF middle domain residues 644-930<br />
**[[4z2n]] – hEF middle domain residues 644-930<br />
**[[4z2m]] – hEF middle domain + histone H3.1 + histone H4<br />
**[[4z2m]] – hEF middle domain + histone H3.1 + histone H4<br />
 +
**[[6gme]] – hEF SH2 domain residues 1317-1334<br />
**[[3psf]], [[3psi]] – yEF core domain residues 235-1259<BR />
**[[3psf]], [[3psi]] – yEF core domain residues 235-1259<BR />
**[[3psj]], [[3psk]] – yEF SH2 domain residues 1247-1451<BR />
**[[3psj]], [[3psk]] – yEF SH2 domain residues 1247-1451<BR />
Line 276: Line 285:
**[[1lqb]], [[1lm8]] – hEloBC + von-Hippel Lindau disease tumor suppressor + hypoxia inducible factor 1 α<br />
**[[1lqb]], [[1lm8]] – hEloBC + von-Hippel Lindau disease tumor suppressor + hypoxia inducible factor 1 α<br />
 +
**[[6i7q]], [[6i7r]] – hEloBC + von-Hippel Lindau disease tumor suppressor + hypoxia inducible factor 2 α<br />
**[[3zrc]], [[3ztc]], [[3ztd]], [[3zun]], [[6fmi]], [[6fmj]], [[6fmk]], [[5nw2]], [[5nw1]], [[5nw0]], [[5nvz]], [[5nvy]], [[5nvx]], [[5nvw]], [[5nvv]], [[4w9l]], [[4w9k]], [[4w9j]], [[4w9i]], [[4w9h]], [[4w9g]], [[4w9f]], [[4w9e]], [[4w9d]], [[4w9c]], [[6gfy]] - hEloBC + von-Hippel Lindau disease tumor suppressor + inhibitor<br />
**[[3zrc]], [[3ztc]], [[3ztd]], [[3zun]], [[6fmi]], [[6fmj]], [[6fmk]], [[5nw2]], [[5nw1]], [[5nw0]], [[5nvz]], [[5nvy]], [[5nvx]], [[5nvw]], [[5nvv]], [[4w9l]], [[4w9k]], [[4w9j]], [[4w9i]], [[4w9h]], [[4w9g]], [[4w9f]], [[4w9e]], [[4w9d]], [[4w9c]], [[6gfy]] - hEloBC + von-Hippel Lindau disease tumor suppressor + inhibitor<br />
-
**[[5t35]] - hEloBC + von-Hippel Lindau disease tumor suppressor + BRD4<br />
+
**[[5t35]], [[6sis]] - hEloBC + von-Hippel Lindau disease tumor suppressor + BRD4<br />
**[[4wqo]] - hEloBC + von-Hippel Lindau disease tumor suppressor + cullin-2 <br />
**[[4wqo]] - hEloBC + von-Hippel Lindau disease tumor suppressor + cullin-2 <br />
**[[6hr2]], [[6hay]], [[6hax]] - hEloBC + von-Hippel Lindau disease tumor suppressor + transcription activator <br />
**[[6hr2]], [[6hay]], [[6hax]] - hEloBC + von-Hippel Lindau disease tumor suppressor + transcription activator <br />
Line 287: Line 297:
**[[6i5n]], [[6i5j]] – hEloBC + suppressor of cytokine signaling + growth hormone receptor peptide<br />
**[[6i5n]], [[6i5j]] – hEloBC + suppressor of cytokine signaling + growth hormone receptor peptide<br />
**[[6i4x]] – hEloBC + suppressor of cytokine signaling + erythropoietin peptide<br />
**[[6i4x]] – hEloBC + suppressor of cytokine signaling + erythropoietin peptide<br />
-
**[[3dcg]] – hEloBC + virion infectivity factor<br />
+
**[[6p59]] - hEloBC + virion infectivity factor + CBF b<br />
**[[3zkj]] - hEloBC + ankyrin rep<br />
**[[3zkj]] - hEloBC + ankyrin rep<br />
**[[1vcb]] – hEloBC + VHL<br />
**[[1vcb]] – hEloBC + VHL<br />
 +
**[[6v9h]] – hEloBC + creatine kinase + ASB-9 – Cryo EM<br />
**[[2fnj]] - mEloBC + GUSTAVUS
**[[2fnj]] - mEloBC + GUSTAVUS
}}
}}
[[Category:Topic Page]]
[[Category:Topic Page]]

Revision as of 10:27, 20 July 2020

3D structures of elongation factor

Updated on 20-July-2020


Proteopedia Page Contributors and Editors (what is this?)

Michal Harel, Joel L. Sussman

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