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Galactosidase 3D structures

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(New page: == 3D Structures of Galactosidase == Updated on {{REVISIONDAY2}}-{{MONTHNAME|{{REVISIONMONTH}}}}-{{REVISIONYEAR}} {{#tree:id=OrganizedByTopic|openlevels=0| *α-Galactosidase **3hg2,...)
Line 8: Line 8:
**[[3hg2]], [[3gxn]], [[1r46]], [[1r47]], [[3s5y]], [[3s5z]] – hAgal A - human<br />
**[[3hg2]], [[3gxn]], [[1r46]], [[1r47]], [[3s5y]], [[3s5z]] – hAgal A - human<br />
**[[3lx9]], [[3lxa]], [[3lxb]], [[3lxc]], [[3tv8]] - hAgal A (mutant) <br />
**[[3lx9]], [[3lxa]], [[3lxb]], [[3lxc]], [[3tv8]] - hAgal A (mutant) <br />
 +
**[[3h53]] - hAgal B (mutant)<br />
 +
**[[1uas]] – Agal – rice<br />
**[[3lrk]] – yAgal 1 (mutant) – yeast<br />
**[[3lrk]] – yAgal 1 (mutant) – yeast<br />
**[[3lrl]], [[3lrm]] – yAgal 1 (mutant) + polysaccharide<br />
**[[3lrl]], [[3lrm]] – yAgal 1 (mutant) + polysaccharide<br />
**[[1zy9]], [[5m0x]] – TmAgal – ''Thermotoga maritima''<br />
**[[1zy9]], [[5m0x]] – TmAgal – ''Thermotoga maritima''<br />
-
**[[3h53]] - hAgal B (mutant)<br />
 
**[[3a24]] – BtAgal – ''Bacterioides thetaiotamicron''<br />
**[[3a24]] – BtAgal – ''Bacterioides thetaiotamicron''<br />
**[[3a5v]] – Agal I – ''Mortierella vinacea''<br />
**[[3a5v]] – Agal I – ''Mortierella vinacea''<br />
**[[3mi6]] – Agal – ''Lactobacillus brevis''<br />
**[[3mi6]] – Agal – ''Lactobacillus brevis''<br />
**[[1szn]] – HjAgal – ''Hypocrea jecorina''<br />
**[[1szn]] – HjAgal – ''Hypocrea jecorina''<br />
-
**[[1uas]] – Agal – rice<br />
 
**[[2xn0]], [[2xn1]] – LaAgal – ''Lactobacillus acidophilus''<br />
**[[2xn0]], [[2xn1]] – LaAgal – ''Lactobacillus acidophilus''<br />
**[[4fnp]], [[4ojy]] – GsAgal (mutant) – ''Geobacillus stearothermophilus''<br />
**[[4fnp]], [[4ojy]] – GsAgal (mutant) – ''Geobacillus stearothermophilus''<br />
Line 23: Line 23:
**[[4xpr]] - PsAgal (mutant)<br />
**[[4xpr]] - PsAgal (mutant)<br />
**[[6f4c]] - Agal – ''Nicotiana benthamiana''<br />
**[[6f4c]] - Agal – ''Nicotiana benthamiana''<br />
 +
**[[6jhp]] - Agal – ''Paecilomyces''<br />
 +
**[[6lcj]] - TtAgal – ''Thermus thermophilus''<br />
 +
**[[6phu]] – SpAgal – ''Streptococcus pneumoniae<''br />
 +
**[[6y2k]] - Agal – ''Marinomonas''<br />
*''α-galactosidase binary complex''
*''α-galactosidase binary complex''
Line 34: Line 38:
**[[3gxt]] – hAgal A + imino sugar<br />
**[[3gxt]] – hAgal A + imino sugar<br />
**[[4nxs]] - hAgal + jirimycin derivative<br />
**[[4nxs]] - hAgal + jirimycin derivative<br />
 +
**[[6ibk]], [[6ibm]], [[6ibr]], [[6ibt]] - hAgal A + trisaccharide + cyclosulfamidate<br />
**[[1t0o]] – HjAgal + galactose<br />
**[[1t0o]] – HjAgal + galactose<br />
**[[2xn2]] - LaAgal + galactose<br />
**[[2xn2]] - LaAgal + galactose<br />
Line 44: Line 49:
**[[5m12]], [[5m16]], [[5m1i]], [[6gx8]], [[6gwg]], [[6gvd]] - TmAgal + sugar<br />
**[[5m12]], [[5m16]], [[5m1i]], [[6gx8]], [[6gwg]], [[6gvd]] - TmAgal + sugar<br />
**[[6gwf]], [[6gta]] - TmAgal (mutant) + sugar<br />
**[[6gwf]], [[6gta]] - TmAgal (mutant) + sugar<br />
 +
**[[6lck]] - TtAgal + saccharide<br />
 +
**[[6phv]] - SpAgal + galactopyranoside derivative<br />
 +
**[[6phw]], [[6phx]], [[6phy]], [[6pi0]] - SpAgal (mutant) + oligosaccharide<br />
*β-Galactosidase
*β-Galactosidase
 +
**[[3w5f]] – toBgal – tomato<br />
 +
**[[5iaz]] - rBgal C-terminal - NMR<br />
**[[3og2]] – TrBgal – ''Trichoderma reesei''<br />
**[[3og2]] – TrBgal – ''Trichoderma reesei''<br />
-
**[[1hn1]], [[1dp0]], [[1f4a]], [[1f4h]], [[4v41]], [[4v40]], [[4ttg]] - EcBgal - Escherichia coli<br />
+
**[[1hn1]], [[1dp0]], [[1f4a]], [[1f4h]], [[4v41]], [[4v40]], [[4ttg]], [[6drv]] - EcBgal - Escherichia coli<br />
-
**[[3j7h]], [[6cvm]] – EcBgal – cryo EM<br />
+
**[[3j7h]], [[6cvm]], [[6x1q]] – EcBgal – cryo EM<br />
**[[3dec]], [[3d3a]], [[3bga]], [[5mt2]], [[5mui]], [[5muj]] – BtBgal<br />
**[[3dec]], [[3d3a]], [[3bga]], [[5mt2]], [[5mui]], [[5muj]] – BtBgal<br />
**[[6etz]], [[6h1p]] - ArBgal – ''Arthrobacter''<br />
**[[6etz]], [[6h1p]] - ArBgal – ''Arthrobacter''<br />
-
**[[1yq2]] - ArBgal (mutant)<br />
+
**[[1yq2]], [[6se8]] - ArBgal (mutant)<br />
**[[1uwi]], [[4eam]], [[5i3d]] - SsBgal (mutant) - ''Sulfolobus solfataricus''<br />
**[[1uwi]], [[4eam]], [[5i3d]] - SsBgal (mutant) - ''Sulfolobus solfataricus''<br />
**[[1uwq]], [[1gow]] – SsBgal<br />
**[[1uwq]], [[1gow]] – SsBgal<br />
Line 60: Line 70:
**[[4ypj]] - BcBgal (mutant) <br />
**[[4ypj]] - BcBgal (mutant) <br />
**[[4ha3]], [[4ha4]] – Bgal – ''Acidilobus saccharovorans''<br />
**[[4ha3]], [[4ha4]] – Bgal – ''Acidilobus saccharovorans''<br />
-
**[[3w5f]] – toBgal – tomato<br />
+
**[[3wq8]], [[6jow]] – Bgal – ''Pyrococcus furiosus''<br />
-
**[[3wq8]] – Bgal – ''Pyrococcus furiosus''<br />
+
**[[4cu6]] – SpBgal catalytic module residues 137-985– ''Streptococcus pneumoniae''<br />
**[[4cu6]] – SpBgal catalytic module residues 137-985– ''Streptococcus pneumoniae''<br />
**[[4cu9]] – SpBgal carbohydrate-binding module II residues 1822-1998 <br />
**[[4cu9]] – SpBgal carbohydrate-binding module II residues 1822-1998 <br />
Line 71: Line 80:
**[[3ob8]], [[3oba]] – Bgal – ''Kluyveromyces lactis''<br />
**[[3ob8]], [[3oba]] – Bgal – ''Kluyveromyces lactis''<br />
**[[5dfa]] - GsBgal (mutant) <br />
**[[5dfa]] - GsBgal (mutant) <br />
-
**[[5dmy]] - BbBgal – ''Bifidobacterium bifidum''<br />
+
**[[5dmy]], [[6quc]] - BbBgal – ''Bifidobacterium bifidum''<br />
**[[5e9a]] - Bgal - ''Rahnella''<br />
**[[5e9a]] - Bgal - ''Rahnella''<br />
**[[5euv]] - ParBgal - ''Paracoccus''<br />
**[[5euv]] - ParBgal - ''Paracoccus''<br />
-
**[[5iaz]] - rBgal C-terminal - NMR<br />
 
**[[5ifp]] - Bgal – ''Aspergillus niger''<br />
**[[5ifp]] - Bgal – ''Aspergillus niger''<br />
**[[6mvh]] - Bgal – ''Roseburia hominis''<br />
**[[6mvh]] - Bgal – ''Roseburia hominis''<br />
 +
**[[6hpd]] - Bgal – ''Formosa agariphila''<br />
 +
**[[6s6z]], [[6sd0]] - TmBgal – Cryo EM <br />
*''β-Galactosidase binary complex with galactose''
*''β-Galactosidase binary complex with galactose''
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**[[3thc]] - hBgal + galactose<br />
**[[3thc]] - hBgal + galactose<br />
**[[3wf3]] - hBgal + galactose + NAG<br />
**[[3wf3]] - hBgal + galactose + NAG<br />
-
**[[1xc6]] - PeBgal + galactose<br />
 
**[[3w5g]], [[6ik5]] - toBgal + galactose<br />
**[[3w5g]], [[6ik5]] - toBgal + galactose<br />
**[[6ik6]], [[6ik7]], [[6ik8]] - toBgal (mutant) + galactobiose<br />
**[[6ik6]], [[6ik7]], [[6ik8]] - toBgal (mutant) + galactobiose<br />
Line 95: Line 104:
**[[4uni]] - BaBgal + galactose <br />
**[[4uni]] - BaBgal + galactose <br />
**[[4uoz]] - BaBgal (mutant) + galactose <br />
**[[4uoz]] - BaBgal (mutant) + galactose <br />
-
**[[4ucf]], [[4uzs]] - BbBgal + galactose <br />
+
**[[4ucf]], [[4uzs]], [[6qub]], [[6qud]] - BbBgal + galactose <br />
**[[5ldr]] - ParBgal + galactose <br />
**[[5ldr]] - ParBgal + galactose <br />
**[[6eon]] - BtBgal + galactose <br />
**[[6eon]] - BtBgal + galactose <br />
 +
**[[1xc6]] - PeBgal + galactose<br />
 +
**[[6sed]] - ArBgal + galactose <br />
*''β-Galactosidase other complexes''
*''β-Galactosidase other complexes''
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**[[1jz6]] - EcBgal (mutant) + inhibitor<br />
**[[1jz6]] - EcBgal (mutant) + inhibitor<br />
**[[4duw]] - EcBgal (mutant) + allolactose<br />
**[[4duw]] - EcBgal (mutant) + allolactose<br />
 +
**[[6tsk]] - EcBgal + ribose – Cryo EM<br />
 +
**[[6tte]] - EcBgal + galactopyranoside derivative – Cryo EM<br />
**[[4dux]] - EcBgal (mutant) + ribose<br />
**[[4dux]] - EcBgal (mutant) + ribose<br />
 +
**[[6tsh]] - EcBgal + jirimycin derivative – Cryo EM<br />
 +
**[[6kuz]] - EcBgal (mutant) + probe<br />
**[[4ckd]] – EcBgal + antibody<br />
**[[4ckd]] – EcBgal + antibody<br />
**[[4cu7]] - SpBgal catalytic module + galacto-isofagomine<br />
**[[4cu7]] - SpBgal catalytic module + galacto-isofagomine<br />
 +
**[[6nzg]] - Bgal + aziridine derivative – ''Bacterioides uniformis''<br />
 +
**[[6seb]], [[6sec]] - ArBgal + galactopyranoside derivative<br />
 +
**[[6se9]], [[6sea]] - ArBgal (mutant) + lactose<br />
*Endo-1,4-β-galactosidase
*Endo-1,4-β-galactosidase

Revision as of 06:45, 2 August 2020

3D Structures of Galactosidase

Updated on 02-August-2020

Proteopedia Page Contributors and Editors (what is this?)

Michal Harel, Joel L. Sussman

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