This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
GTPase HRas
From Proteopedia
(Difference between revisions)
| Line 30: | Line 30: | ||
== Structural highlights == | == Structural highlights == | ||
Interactions with the <scene name='37/379455/Cv/6'>nucleotide phosphate moiety in the active site</scene> of GTPase Hras determine its active conformation<ref>PMID:242356730</ref>. Water molecules shown as red spheres. | Interactions with the <scene name='37/379455/Cv/6'>nucleotide phosphate moiety in the active site</scene> of GTPase Hras determine its active conformation<ref>PMID:242356730</ref>. Water molecules shown as red spheres. | ||
| + | ==3D structures of GTPase Hras== | ||
| + | [[GTPase Hras 3D structures]] | ||
</StructureSection> | </StructureSection> | ||
| Line 47: | Line 49: | ||
*HRAS p21 catalytic domain complex with nucleotides | *HRAS p21 catalytic domain complex with nucleotides | ||
| - | **[[1crp]], [[1crq]], [[1crr]], [[1aa9]] – hHRAS + GDP - NMR<BR / > | ||
**[[1q21]], [[4q21]] – hHRAS + GDP<BR / > | **[[1q21]], [[4q21]] – hHRAS + GDP<BR / > | ||
| - | **[[4l9s]] - hHRAS (mutant) + GDP<br /> | + | **[[1crp]], [[1crq]], [[1crr]], [[1aa9]] – hHRAS + GDP - NMR<BR / > |
| + | **[[4l9s]], [[6dzh]], [[6mqt]], [[1lf0]], [[1zw6]], [[2cl6]], [[2cl7]], [[2clc]], [[2evw]], [[1jah]], [[1jai]] - hHRAS (mutant) + GDP<br /> | ||
**[[5vbe]], [[5vbz]] - hHRAS (mutant) + GDP + pyrazole derivative<br /> | **[[5vbe]], [[5vbz]] - hHRAS (mutant) + GDP + pyrazole derivative<br /> | ||
| + | **[[5zc6]] - hHRAS (mutant) + GNP + naphthalene derivative<br /> | ||
**[[5wdo]] - hHRAS + GMPPNP<br /> | **[[5wdo]] - hHRAS + GMPPNP<br /> | ||
**[[4l9w]], [[5wdp]], [[5wdq]] - hHRAS (mutant) + GMPPNP<br /> | **[[4l9w]], [[5wdp]], [[5wdq]] - hHRAS (mutant) + GMPPNP<br /> | ||
**[[6q21]], [[121p]] – hHRAS + GCP<BR / > | **[[6q21]], [[121p]] – hHRAS + GCP<BR / > | ||
**[[1qra]] - hHRAS + GTP<BR / > | **[[1qra]] - hHRAS + GTP<BR / > | ||
| + | **[[1lf0]], [[1zw6]], [[2cl6]], [[2cl7]], [[2clc]], [[2evw]], [[1jah]], [[1jai]]- hHRAS (mutant) + GTP<BR / > | ||
| + | **[[1clu]], [[1rvd]], [[1iaq]], [[1gnr]] - hHRAS (mutant) + GTP derivative<br / > | ||
**[[1ctq]], [[4efl]], [[4rsg]], [[5b2z]], [[5b30]], [[5x9s]] - hHRAS + GPPNHP<BR / > | **[[1ctq]], [[4efl]], [[4rsg]], [[5b2z]], [[5b30]], [[5x9s]] - hHRAS + GPPNHP<BR / > | ||
**[[1xcm]], [[2cl0]], [[2rga]], [[2rgb]], [[2rgc]], [[2rgd]], [[2rge]], [[2rgg]], [[3kkm]], [[3kkn]], [[4efm]], [[4efn]] - hHRAS (mutant) + GPPNHP<BR / > | **[[1xcm]], [[2cl0]], [[2rga]], [[2rgb]], [[2rgc]], [[2rgd]], [[2rge]], [[2rgg]], [[3kkm]], [[3kkn]], [[4efm]], [[4efn]] - hHRAS (mutant) + GPPNHP<BR / > | ||
| - | **[[1gnp]], [[1gnq]] - hHRAS + guanylate derivative<br / > | + | **[[1gnp]], [[1gnq]], [[6q21]] - hHRAS + guanylate derivative<br / > |
**[[4xvq]], [[4xvr]] - hHRAS (mutant) + guanylate derivative<br /> | **[[4xvq]], [[4xvr]] - hHRAS (mutant) + guanylate derivative<br /> | ||
**[[2lcf]] - hHRAS (mutant) + guanylate derivative - NMR<BR / > | **[[2lcf]] - hHRAS (mutant) + guanylate derivative - NMR<BR / > | ||
| Line 64: | Line 69: | ||
**[[3lbh]], [[3lbi]], [[3lbn]] - hHRAS + salt + guanylate derivative<br / > | **[[3lbh]], [[3lbi]], [[3lbn]] - hHRAS + salt + guanylate derivative<br / > | ||
**[[3l8y]] - hHRAS + cyclen + guanylate derivative<br / > | **[[3l8y]] - hHRAS + cyclen + guanylate derivative<br / > | ||
| - | **[[ | + | **[[2lwi]] – hHRAS (mutant) + inhibitor + GNP<br /> |
| - | + | ||
| - | + | ||
*HRAS p21 catalytic domain complex with protein | *HRAS p21 catalytic domain complex with protein | ||
| Line 75: | Line 78: | ||
**[[1nvu]], [[1nvv]], [[1nvx]], [[1xd2]], [[4nyi]], [[4nyj]], [[4nym]] - hHRAS (mutant) + son of sevenless-1 homolog<BR / > | **[[1nvu]], [[1nvv]], [[1nvx]], [[1xd2]], [[4nyi]], [[4nyj]], [[4nym]] - hHRAS (mutant) + son of sevenless-1 homolog<BR / > | ||
**[[4uru]], [[4urv]], [[4urw]], [[4urx]], [[4ury]], [[4urz]], [[4us0]], [[4us1]], [[4us2]] - hHRAS + son of sevenless-1 + inhibitor<br /> | **[[4uru]], [[4urv]], [[4urw]], [[4urx]], [[4ury]], [[4urz]], [[4us0]], [[4us1]], [[4us2]] - hHRAS + son of sevenless-1 + inhibitor<br /> | ||
| + | **[[6bvj]], [[6bvk]] - hHRAS + son of sevenless-1 + activator<br /> | ||
| + | **[[6bvi]], [[6bvl]], [[6bvm]], [[6cuo]], [[6cup]], [[6cur]], [[6d55]], [[6d56]], [[6d59]], [[6d5e]], [[6d5g]], [[6d5h]], [[6d5j]], [[6d5l]], [[6d5m]], [[6d5v]], [[6d5w]] - hHRAS (mutant) + son of sevenless-1 + activator<br /> | ||
**[[1k8r]] - hHRAS + Byr2 RAS-binding domain<BR / > | **[[1k8r]] - hHRAS + Byr2 RAS-binding domain<BR / > | ||
**[[2c5l]] - hHRAS (mutant) + phosphoinositide-specific phospholipase RA2 domain<BR / > | **[[2c5l]] - hHRAS (mutant) + phosphoinositide-specific phospholipase RA2 domain<BR / > | ||
**[[2uzi]], [[2vh5]] - hHRAS (mutant) + antibody<BR / > | **[[2uzi]], [[2vh5]] - hHRAS (mutant) + antibody<BR / > | ||
**[[3ddc]] - hHRAS (mutant) + Ras association domain containing family protein RAS-binding domain<BR / > | **[[3ddc]] - hHRAS (mutant) + Ras association domain containing family protein RAS-binding domain<BR / > | ||
| - | **[[3kud]] | + | **[[3kud]] - hHRAS + RAF proto-oncogene Ser/Thr-protein kinase + GDP<br /> |
| + | **[[4g0n]] - hHRAS + RAF proto-oncogene Ser/Thr-protein kinase + GNP<br /> | ||
| + | **[[6ntc]], [[4g3x]], [[6ntd]] - hHRAS (mutant) + RAF proto-oncogene Ser/Thr-protein kinase + GNP<br /> | ||
**[[1lfd]] - hHRAS + Ral guanine nucleotide dissociation stimulator RAS-binding domain<br /> | **[[1lfd]] - hHRAS + Ral guanine nucleotide dissociation stimulator RAS-binding domain<br /> | ||
**[[4k81]] – hHRAS + growth factor receptor-bound protein<br /> | **[[4k81]] – hHRAS + growth factor receptor-bound protein<br /> | ||
| Line 87: | Line 94: | ||
**[[6amb]] – hHRAS + afadin<br /> | **[[6amb]] – hHRAS + afadin<br /> | ||
**[[1he8]] – hHRAS (mutant) + P3K<br /> | **[[1he8]] – hHRAS (mutant) + P3K<br /> | ||
| - | + | **[[6kyh]] – hHRAS + Shank3 + GNP<br /> | |
| - | + | ||
| - | + | ||
| - | **[[ | + | |
| - | + | ||
}} | }} | ||
Revision as of 07:10, 11 August 2020
| |||||||||||
3D structures of GTPase Hras
Updated on 11-August-2020
References
- Milburn, et al. Science. 1990. 247: 939-45.
- Wittinghofer and Pai. Trends Biochem Sci. 1991. 16: 382-7.
- Malumbres and Barbacid. Nature Rev Cancer. 2003. 3: 459-65.
- Bos, Rehmann, and Wittinghofer. Cell. 2007. 129: 865-77.
- Karnoub and Weinberg. Nature Rev Mol Cell Biol. 2008. 9: 517-531.
Proteopedia Page Contributors and Editors (what is this?)
Michal Harel, David Canner, Alexander Berchansky, Joel L. Sussman, Joseph Lipsick, Jaime Prilusky

