This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
Integrin 3D structures
From Proteopedia
(Difference between revisions)
(New page: ==3D structures of integrin== Updated on {{REVISIONDAY2}}-{{MONTHNAME|{{REVISIONMONTH}}}}-{{REVISIONYEAR}} {{#tree:id=OrganizedByTopic|openlevels=0| *IG CR3 **1ido – hIG I domain ...) |
|||
| Line 32: | Line 32: | ||
**[[3hi6]] - hIG I domain (mutant) + antibody + Mn<br /> | **[[3hi6]] - hIG I domain (mutant) + antibody + Mn<br /> | ||
| - | *IG CD11b | + | *IG CD11b I domain 143-337 or IG α-M |
| - | **[[1bho]] - hIG | + | **[[1idn]], [[1na5]] - hIG<br /> |
| - | **[[1bhq]] - hIG | + | **[[1mf7]] - hIG (mutant)<br /> |
| - | **[[1m1u]] - hIG | + | **[[1bho]] - hIG + Mg<br /> |
| - | **[[1n9z]] - hIG | + | **[[1bhq]] - hIG + Cd<br /> |
| - | **[[ | + | **[[1m1u]] - hIG (mutant) + Ca<br /> |
| - | **[[ | + | **[[1n9z]] - hIG (mutant) + Mg<br /> |
| + | **[[3q3g]], [[3qa3]] – hIG + antibody<br /> | ||
| + | **[[4m76]] – hIG + complement C3<br /> | ||
| + | **[[2lke]], [[2lkj – hIG cytoplasmic domain – NMR<br /> | ||
| + | **[[4xw2]] – hIG + simvastatin<br /> | ||
| + | **[[6rhv]], [[6rhw]] – hIG + cytolysin<br /> | ||
*IG CD11c | *IG CD11c | ||
| Line 47: | Line 52: | ||
*IG α-1 (CD49a) | *IG α-1 (CD49a) | ||
| - | **[[1ck4]] - rIG I domain – rat<br /> | ||
**[[4a0q]] - hIG I domain (mutant) + Mg<br /> | **[[4a0q]] - hIG I domain (mutant) + Mg<br /> | ||
**[[2l8s]] - hIG transmembrane domain – NMR<BR /> | **[[2l8s]] - hIG transmembrane domain – NMR<BR /> | ||
**[[5hgj]] - hIG VWFA domain<br /> | **[[5hgj]] - hIG VWFA domain<br /> | ||
| + | **[[2m32]] - hIG I domain + collagen peptide<br /> | ||
| + | **[[1ck4]] - rIG I domain – rat<br /> | ||
**[[1mhp]] - rIG I domain (mutant) + antibody + Mn<br /> | **[[1mhp]] - rIG I domain (mutant) + antibody + Mn<br /> | ||
**[[2b2x]] - rIG I domain (mutant) + antibody + Mg<br /> | **[[2b2x]] - rIG I domain (mutant) + antibody + Mg<br /> | ||
| - | **[[2m32]] - hIG I domain + collagen peptide<br /> | ||
*IG α-2 (CD49b) | *IG α-2 (CD49b) | ||
| Line 89: | Line 94: | ||
**[[2vdm]], [[2vdn]], [[3t3m]], [[3t3p]] – hIG headpiece + antibody + antagonist + Mg<br /> | **[[2vdm]], [[2vdn]], [[3t3m]], [[3t3p]] – hIG headpiece + antibody + antagonist + Mg<br /> | ||
**[[2vdo]], [[2vdp]], [[2vdq]], [[2vdr]] – hIG headpiece + antibody + fibrinogen peptide + Mg<br /> | **[[2vdo]], [[2vdp]], [[2vdq]], [[2vdr]] – hIG headpiece + antibody + fibrinogen peptide + Mg<br /> | ||
| + | **[[6v4p]] – hIG + antibody – Cryo-EM<br /> | ||
*IG α-4 | *IG α-4 | ||
| Line 132: | Line 138: | ||
**[[5e6u]] – hIG headpiece (mutant) + Ni<br /> | **[[5e6u]] – hIG headpiece (mutant) + Ni<br /> | ||
| - | *IG α- | + | *IG α-V β-3 |
| - | **[[ | + | **[[6mk0]] – hIG + antagonist<br /> |
| - | **[[ | + | **[[6msl]] – hIG + cysteine knot protein<br /> |
| - | **[[ | + | **[[6msu]] – hIG + EETI-II<br /> |
| - | **[[ | + | **[[6naj]] – hIG + fibronectin<br /> |
*IG α-V β-8 | *IG α-V β-8 | ||
| - | **[[6djp]] – hIG + antibody – Cryo EM<br /> | + | **[[6djp]], [[6ujb]], [[6ujc]] – hIG + antibody – Cryo EM<br /> |
| + | **[[6om1]] – hIG (mutant)<br /> | ||
| + | **[[6om2]] – hIG (mutant) + Protgf-b1 RGD peptide<br /> | ||
| + | **[[6uja]] – hIG + Protgf-b1 RGD – Cryo EM<br /> | ||
*IG α-X | *IG α-X | ||
Revision as of 08:49, 25 August 2020
3D structures of integrin
Updated on 25-August-2020 {{#tree:id=OrganizedByTopic|openlevels=0|
- IG CR3
- IG CD11a or IG α-L
- IG CD11a complexes
- 1cqp - hIG I domain + lovastatin + Mg
- 1mq8, 3bn3, 3tcx - hIG I domain (mutant) + intracellular adhesion molecule + Mg
- 1t0p - hIG I domain + intracellular adhesion molecule-3 + Mg
- 1rd4, 2ica, 3bqm, 3bqn, 3e2m - hIG I domain + inhibitor
- 2o7n, 3m6f - hIG I domain + antagonist
- 1xdd, 1xdg, 1xuo - hIG I domain + inhibitor + Mg
- 4ixd - hIG I domain + activator + Mg
- 3f78 - hIG I domain + anesthetic + Mg
- 3eoa, 3eob - hIG I domain + antibody
- 3hi6 - hIG I domain (mutant) + antibody + Mn
- 1cqp - hIG I domain + lovastatin + Mg
- IG CD11b I domain 143-337 or IG α-M
- IG CD11c
- 1n3y - hIG I domain (mutant)
- IG α-1 (CD49a)
- IG α-2 (CD49b)
- IG α-2b
- 2k1a - hIG transmembrane domain – NMR
- 2k1a - hIG transmembrane domain – NMR
- IG α-1 β-1 (CD49a-CD49b)
- IG α-2 (CD49b) β
- IG α-2b β-3 (CD61)
- 1kup, 1kuz – hIG proximal domain – NMR
- 1m8o - hIG cytoplasmic domain – NMR
- 4cak – hIG – Cryo-EM
- 2k9j, 2knc - hIG transmembrane domain – NMR
- 1tye, 3fcu, 3fcs – hIG + Mg
- 3fc3 – hIG (mutant) + Mg
- 2vc2, 2vdk, 2vdl, 3nid, 3nif, 3nig, 3zdx, 3zdy, 3zdz, 3ze0, 3ze1, 3ze2, 5hdb – hIG headpiece + antibody + Mg
- 4z7q, 4z7o, 4z7n – hIG headpiece + antibody + Mg + tetrapeptide
- 2vdm, 2vdn, 3t3m, 3t3p – hIG headpiece + antibody + antagonist + Mg
- 2vdo, 2vdp, 2vdq, 2vdr – hIG headpiece + antibody + fibrinogen peptide + Mg
- 6v4p – hIG + antibody – Cryo-EM
- 1kup, 1kuz – hIG proximal domain – NMR
- IG α-4
- 4irz - hIG + antibody
- 4irz - hIG + antibody
- IG α-4 (CD49d) β-7
- IG α-5 (CD49e) β-1 (CD29)
- IG α-5 (CD49e) β-3 (CD61) ectodomain
- IG α-5 β-6
- IG α-L
- IG α-L β-2
- 5e6u – hIG headpiece (mutant) + Ni
- 5e6u – hIG headpiece (mutant) + Ni
- IG α-V β-3
- IG α-V β-8
- IG α-X
- 2luv – hIG cytoplasmic domain – NMR
- 2luv – hIG cytoplasmic domain – NMR
- IG α-X β-2 (CD18)
- IG β-1D
- 3g9w – hIG cytoplasmic tail + talin 2 F2-F3 domain
- 3g9w – hIG cytoplasmic tail + talin 2 F2-F3 domain
- IG β-2 (CD18)
- IG β-3 (CD61)
- IG β-4 (CD104; Gp150)
- 2f7q, 3f7r, 1qg3, 3f7q, 4wtw, 4wtx - hIG fibronectin type III domain
- 2yrz – hIG fibronectin type III domain – NMR
- 3f7p, 4q58 - hIG fibronectin type III domain + plectin-1
- 6gvl - hIG fibronectin type III domain + dystonin
- 6gvk - hIG fibronectin type III domain (mutant) + dystonin
- 3fq4, 3fso, 3h6a – hIG Calx-β domain
- 6hyf - rIG fibronectin type III domain
- 2f7q, 3f7r, 1qg3, 3f7q, 4wtw, 4wtx - hIG fibronectin type III domain
- IG β-7
}}
