This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
3fkf
From Proteopedia
(Difference between revisions)
| (4 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
| - | [[Image:3fkf.png|left|200px]] | ||
| - | + | ==thiol-disulfide oxidoreductase from Bacteroides fragilis NCTC 9343== | |
| - | + | <StructureSection load='3fkf' size='340' side='right'caption='[[3fkf]], [[Resolution|resolution]] 2.20Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | + | <table><tr><td colspan='2'>[[3fkf]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Bacfn Bacfn]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3FKF OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=3FKF FirstGlance]. <br> | |
| - | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene></td></tr> | |
| - | == | + | <tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> |
| - | [[3fkf]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/ | + | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Enzyme-thiol_transhydrogenase_(glutathione-disulfide) Enzyme-thiol transhydrogenase (glutathione-disulfide)], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.8.4.7 1.8.4.7] </span></td></tr> |
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=3fkf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3fkf OCA], [http://pdbe.org/3fkf PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3fkf RCSB], [http://www.ebi.ac.uk/pdbsum/3fkf PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3fkf ProSAT], [http://www.topsan.org/Proteins/MCSG/3fkf TOPSAN]</span></td></tr> | ||
| + | </table> | ||
| + | == Evolutionary Conservation == | ||
| + | [[Image:Consurf_key_small.gif|200px|right]] | ||
| + | Check<jmol> | ||
| + | <jmolCheckbox> | ||
| + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/fk/3fkf_consurf.spt"</scriptWhenChecked> | ||
| + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3fkf ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
==See Also== | ==See Also== | ||
*[[Protein disulfide oxidoreductase|Protein disulfide oxidoreductase]] | *[[Protein disulfide oxidoreductase|Protein disulfide oxidoreductase]] | ||
| - | [[Category: | + | __TOC__ |
| - | [[Category: Duke, N E.C | + | </StructureSection> |
| - | [[Category: Freeman, L | + | [[Category: Bacfn]] |
| - | [[Category: Joachimiak, A | + | [[Category: Large Structures]] |
| - | [[Category: | + | [[Category: Duke, N E.C]] |
| - | [[Category: Tesar, C | + | [[Category: Freeman, L]] |
| + | [[Category: Joachimiak, A]] | ||
| + | [[Category: Structural genomic]] | ||
| + | [[Category: Tesar, C]] | ||
[[Category: Mcsg]] | [[Category: Mcsg]] | ||
| - | [[Category: Midwest center for structural genomic]] | ||
[[Category: Oxidoreductase]] | [[Category: Oxidoreductase]] | ||
| - | [[Category: Protein structure initiative | + | [[Category: PSI, Protein structure initiative]] |
| - | + | ||
| - | + | ||
[[Category: Thiol disulfide oxidoreductase]] | [[Category: Thiol disulfide oxidoreductase]] | ||
Current revision
thiol-disulfide oxidoreductase from Bacteroides fragilis NCTC 9343
| |||||||||||
