This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3g0o

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
(New page: '''Unreleased structure''' The entry 3g0o is ON HOLD Authors: Eswaramoorthy, S., Burley, S.K., Swaminathan, S., New York Structural GenomiX Research Consortium (NYSGXRC) Description: C...)
Current revision (10:33, 9 September 2020) (edit) (undo)
 
(6 intermediate revisions not shown.)
Line 1: Line 1:
-
'''Unreleased structure'''
 
-
The entry 3g0o is ON HOLD
+
==Crystal structure of 3-hydroxyisobutyrate dehydrogenase (ygbJ) from Salmonella typhimurium==
-
 
+
<StructureSection load='3g0o' size='340' side='right'caption='[[3g0o]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
-
Authors: Eswaramoorthy, S., Burley, S.K., Swaminathan, S., New York Structural GenomiX Research Consortium (NYSGXRC)
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[3g0o]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3G0O OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=3G0O FirstGlance]. <br>
-
Description: Crystal structure of 3-hydroxyisobutyrate dehydrogenase (ygbJ) from Salmonella typhimurium
+
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=TLA:L(+)-TARTARIC+ACID'>TLA</scene></td></tr>
-
 
+
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Feb 11 12:36:23 2009''
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=3g0o FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3g0o OCA], [http://pdbe.org/3g0o PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3g0o RCSB], [http://www.ebi.ac.uk/pdbsum/3g0o PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3g0o ProSAT], [http://www.topsan.org/Proteins/NYSGXRC/3g0o TOPSAN]</span></td></tr>
 +
</table>
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/g0/3g0o_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3g0o ConSurf].
 +
<div style="clear:both"></div>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Large Structures]]
 +
[[Category: Burley, S K]]
 +
[[Category: Eswaramoorthy, S]]
 +
[[Category: Structural genomic]]
 +
[[Category: Swaminathan, S]]
 +
[[Category: NYSGXRC, New York SGX Research Center for Structural Genomics]]
 +
[[Category: Oxidoreductase]]
 +
[[Category: PSI, Protein structure initiative]]
 +
[[Category: Target 11128h]]
 +
[[Category: Tartaric acid]]
 +
[[Category: Valine catabolism]]

Current revision

Crystal structure of 3-hydroxyisobutyrate dehydrogenase (ygbJ) from Salmonella typhimurium

PDB ID 3g0o

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools