3h0c
From Proteopedia
(Difference between revisions)
(New page: '''Unreleased structure''' The entry 3h0c is ON HOLD Authors: Nordhoff, Sonja, Cerezo-Galvez, Silvia, Deppe, Holger, Hill, Oliver, Lopez-Canet, Meritxell, Rummey, Christian, Thiemann, M...) |
|||
(11 intermediate revisions not shown.) | |||
Line 1: | Line 1: | ||
- | '''Unreleased structure''' | ||
- | + | ==Crystal Structure of Human Dipeptidyl Peptidase IV (CD26) in Complex with a Reversed Amide Inhibitor== | |
+ | <StructureSection load='3h0c' size='340' side='right'caption='[[3h0c]], [[Resolution|resolution]] 2.66Å' scene=''> | ||
+ | == Structural highlights == | ||
+ | <table><tr><td colspan='2'>[[3h0c]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3H0C OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=3H0C FirstGlance]. <br> | ||
+ | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=PS4:N-({(2S)-1-[(3R)-3-AMINO-4-(3-CHLOROPHENYL)BUTANOYL]PYRROLIDIN-2-YL}METHYL)-3-(METHYLSULFONYL)BENZAMIDE'>PS4</scene></td></tr> | ||
+ | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[2bua|2bua]], [[2bub|2bub]], [[2buc|2buc]]</td></tr> | ||
+ | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Dipeptidyl-peptidase_IV Dipeptidyl-peptidase IV], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.4.14.5 3.4.14.5] </span></td></tr> | ||
+ | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=3h0c FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3h0c OCA], [http://pdbe.org/3h0c PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3h0c RCSB], [http://www.ebi.ac.uk/pdbsum/3h0c PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3h0c ProSAT]</span></td></tr> | ||
+ | </table> | ||
+ | == Function == | ||
+ | [[http://www.uniprot.org/uniprot/DPP4_HUMAN DPP4_HUMAN]] Cell surface glycoprotein receptor involved in the costimulatory signal essential for T-cell receptor (TCR)-mediated T-cell activation. Acts as a positive regulator of T-cell coactivation, by binding at least ADA, CAV1, IGF2R, and PTPRC. Its binding to CAV1 and CARD11 induces T-cell proliferation and NF-kappa-B activation in a T-cell receptor/CD3-dependent manner. Its interaction with ADA also regulates lymphocyte-epithelial cell adhesion. In association with FAP is involved in the pericellular proteolysis of the extracellular matrix (ECM), the migration and invasion of endothelial cells into the ECM. May be involved in the promotion of lymphatic endothelial cells adhesion, migration and tube formation. When overexpressed, enhanced cell proliferation, a process inhibited by GPC3. Acts also as a serine exopeptidase with a dipeptidyl peptidase activity that regulates various physiological processes by cleaving peptides in the circulation, including many chemokines, mitogenic growth factors, neuropeptides and peptide hormones. Removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline.<ref>PMID:10951221</ref> <ref>PMID:17549790</ref> <ref>PMID:10570924</ref> <ref>PMID:10900005</ref> <ref>PMID:11772392</ref> <ref>PMID:14691230</ref> <ref>PMID:16651416</ref> <ref>PMID:17287217</ref> <ref>PMID:18708048</ref> | ||
+ | == Evolutionary Conservation == | ||
+ | [[Image:Consurf_key_small.gif|200px|right]] | ||
+ | Check<jmol> | ||
+ | <jmolCheckbox> | ||
+ | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/h0/3h0c_consurf.spt"</scriptWhenChecked> | ||
+ | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
+ | <text>to colour the structure by Evolutionary Conservation</text> | ||
+ | </jmolCheckbox> | ||
+ | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3h0c ConSurf]. | ||
+ | <div style="clear:both"></div> | ||
- | + | ==See Also== | |
- | + | *[[Dipeptidyl peptidase 3D structures|Dipeptidyl peptidase 3D structures]] | |
- | + | == References == | |
- | + | <references/> | |
- | + | __TOC__ | |
+ | </StructureSection> | ||
+ | [[Category: Dipeptidyl-peptidase IV]] | ||
+ | [[Category: Homo sapiens]] | ||
+ | [[Category: Large Structures]] | ||
+ | [[Category: Cerezo-Galvez, S]] | ||
+ | [[Category: Deppe, H]] | ||
+ | [[Category: Edwards, P J]] | ||
+ | [[Category: Feurer, A]] | ||
+ | [[Category: Hill, O]] | ||
+ | [[Category: Lopez-Canet, M]] | ||
+ | [[Category: Matassa, V G]] | ||
+ | [[Category: Nordhoff, S]] | ||
+ | [[Category: Rummey, C]] | ||
+ | [[Category: Thiemann, M]] | ||
+ | [[Category: Aminopeptidase]] | ||
+ | [[Category: Cell membrane]] | ||
+ | [[Category: Diabetes mellitus]] | ||
+ | [[Category: Disulfide bond]] | ||
+ | [[Category: Dpp-iv]] | ||
+ | [[Category: Drug design]] | ||
+ | [[Category: Glycoprotein]] | ||
+ | [[Category: Hydrolase]] | ||
+ | [[Category: Membrane]] | ||
+ | [[Category: Protease]] | ||
+ | [[Category: Secreted]] | ||
+ | [[Category: Serine protease]] | ||
+ | [[Category: Signal-anchor]] | ||
+ | [[Category: Transmembrane]] |
Current revision
Crystal Structure of Human Dipeptidyl Peptidase IV (CD26) in Complex with a Reversed Amide Inhibitor
|
Categories: Dipeptidyl-peptidase IV | Homo sapiens | Large Structures | Cerezo-Galvez, S | Deppe, H | Edwards, P J | Feurer, A | Hill, O | Lopez-Canet, M | Matassa, V G | Nordhoff, S | Rummey, C | Thiemann, M | Aminopeptidase | Cell membrane | Diabetes mellitus | Disulfide bond | Dpp-iv | Drug design | Glycoprotein | Hydrolase | Membrane | Protease | Secreted | Serine protease | Signal-anchor | Transmembrane