This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
5yr1
From Proteopedia
(Difference between revisions)
(New page: '''Unreleased structure''' The entry 5yr1 is ON HOLD Authors: Negishi, H., Abe, S., Yamashita, K., Hirata, K., Niwase, K., Boudes, M., Coulibaly, F., Mori, H., Ueno, T. Description: Cr...) |
|||
| (4 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
| - | '''Unreleased structure''' | ||
| - | + | ==Crystal Structure of Cypovirus Polyhedra R13A/E73C/Y83C/S193C/A194C Mutant== | |
| + | <StructureSection load='5yr1' size='340' side='right'caption='[[5yr1]], [[Resolution|resolution]] 1.72Å' scene=''> | ||
| + | == Structural highlights == | ||
| + | <table><tr><td colspan='2'>[[5yr1]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Bmcpv Bmcpv]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5YR1 OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=5YR1 FirstGlance]. <br> | ||
| + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene></td></tr> | ||
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=5yr1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5yr1 OCA], [http://pdbe.org/5yr1 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5yr1 RCSB], [http://www.ebi.ac.uk/pdbsum/5yr1 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5yr1 ProSAT]</span></td></tr> | ||
| + | </table> | ||
| + | == Function == | ||
| + | [[http://www.uniprot.org/uniprot/PYHD_CPVBM PYHD_CPVBM]] Major component of the virus occlusion bodies, which are large proteinaceous structures (polyhedra), that protect the virus from the outside environment for extended periods until they are ingested by insect larvae. | ||
| + | <div style="background-color:#fffaf0;"> | ||
| + | == Publication Abstract from PubMed == | ||
| + | Protein crystals are formed via ordered arrangements of proteins, which assemble to form supramolecular structures. Here, we show a method for the assembly of supramolecular protein cages within a crystalline environment. The cages are stabilized by covalent cross-linking allowing their release via dissolution of the crystal. The high stability of the desiccated protein crystals allows cages to be constructed. | ||
| - | + | Supramolecular protein cages constructed from a crystalline protein matrix.,Negishi H, Abe S, Yamashita K, Hirata K, Niwase K, Boudes M, Coulibaly F, Mori H, Ueno T Chem Commun (Camb). 2018 Feb 20;54(16):1988-1991. doi: 10.1039/c7cc08689j. PMID:29405208<ref>PMID:29405208</ref> | |
| - | + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | |
| - | + | </div> | |
| - | + | <div class="pdbe-citations 5yr1" style="background-color:#fffaf0;"></div> | |
| - | + | == References == | |
| - | + | <references/> | |
| - | [[Category: | + | __TOC__ |
| - | [[Category: | + | </StructureSection> |
| + | [[Category: Bmcpv]] | ||
| + | [[Category: Large Structures]] | ||
[[Category: Abe, S]] | [[Category: Abe, S]] | ||
| + | [[Category: Boudes, M]] | ||
[[Category: Coulibaly, F]] | [[Category: Coulibaly, F]] | ||
[[Category: Hirata, K]] | [[Category: Hirata, K]] | ||
| + | [[Category: Mori, H]] | ||
| + | [[Category: Negishi, H]] | ||
| + | [[Category: Niwase, K]] | ||
[[Category: Ueno, T]] | [[Category: Ueno, T]] | ||
| + | [[Category: Yamashita, K]] | ||
| + | [[Category: Disulfide bond]] | ||
| + | [[Category: In vivo protein crystal]] | ||
| + | [[Category: Polyhedra]] | ||
| + | [[Category: Viral protein]] | ||
Current revision
Crystal Structure of Cypovirus Polyhedra R13A/E73C/Y83C/S193C/A194C Mutant
| |||||||||||
Categories: Bmcpv | Large Structures | Abe, S | Boudes, M | Coulibaly, F | Hirata, K | Mori, H | Negishi, H | Niwase, K | Ueno, T | Yamashita, K | Disulfide bond | In vivo protein crystal | Polyhedra | Viral protein
