This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
3nwr
From Proteopedia
(Difference between revisions)
| (4 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
| - | {{STRUCTURE_3nwr| PDB=3nwr | SCENE= }} | ||
| - | ===Crystal structure of a rubisco-like protein from Burkholderia fungorum=== | ||
| - | == | + | ==Crystal structure of a rubisco-like protein from Burkholderia fungorum== |
| - | [[3nwr]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Burkholderia_fungorum Burkholderia fungorum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3NWR OCA]. | + | <StructureSection load='3nwr' size='340' side='right'caption='[[3nwr]], [[Resolution|resolution]] 1.50Å' scene=''> |
| + | == Structural highlights == | ||
| + | <table><tr><td colspan='2'>[[3nwr]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Burkholderia_fungorum Burkholderia fungorum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3NWR OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=3NWR FirstGlance]. <br> | ||
| + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr> | ||
| + | <tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=KCX:LYSINE+NZ-CARBOXYLIC+ACID'>KCX</scene></td></tr> | ||
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=3nwr FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3nwr OCA], [http://pdbe.org/3nwr PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3nwr RCSB], [http://www.ebi.ac.uk/pdbsum/3nwr PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3nwr ProSAT]</span></td></tr> | ||
| + | </table> | ||
| + | == Evolutionary Conservation == | ||
| + | [[Image:Consurf_key_small.gif|200px|right]] | ||
| + | Check<jmol> | ||
| + | <jmolCheckbox> | ||
| + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/nw/3nwr_consurf.spt"</scriptWhenChecked> | ||
| + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3nwr ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
[[Category: Burkholderia fungorum]] | [[Category: Burkholderia fungorum]] | ||
| - | [[Category: Almo, S C | + | [[Category: Large Structures]] |
| - | [[Category: Fedorov, A A | + | [[Category: Almo, S C]] |
| - | [[Category: Fedorov, E V | + | [[Category: Fedorov, A A]] |
| - | [[Category: Gerlt, J A | + | [[Category: Fedorov, E V]] |
| - | [[Category: Imker, H J | + | [[Category: Gerlt, J A]] |
| + | [[Category: Imker, H J]] | ||
[[Category: Lyase]] | [[Category: Lyase]] | ||
[[Category: Rubisco-like protein]] | [[Category: Rubisco-like protein]] | ||
Current revision
Crystal structure of a rubisco-like protein from Burkholderia fungorum
| |||||||||||

