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Signal recognition particle protein
From Proteopedia
(Difference between revisions)
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*Signal recognition particle | *Signal recognition particle | ||
| - | **[[ | + | **[[6y2z]], [[6y31]] – hSRP54 NG domain 1-296 - human<br /> |
| + | **[[6y30]] – hSRP54 NG domain (mutant)<br /> | ||
| + | **[[1qb2]] – hSRP54 M domain 326-434<br /> | ||
**[[4p3f]] – hSRP68 (mutant)<br /> | **[[4p3f]] – hSRP68 (mutant)<br /> | ||
**[[5m72]], [[5wrv]] – hSRP68 + SRP72<br /> | **[[5m72]], [[5wrv]] – hSRP68 + SRP72<br /> | ||
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**[[2ng1]] - TaSRP54-like NG domain (mutant)<br /> | **[[2ng1]] - TaSRP54-like NG domain (mutant)<br /> | ||
**[[2ffh]] - TaSRP54-like residues 1-425 (mutant)<br /> | **[[2ffh]] - TaSRP54-like residues 1-425 (mutant)<br /> | ||
| - | **[[1kvn]], [[1kvv]] – | + | **[[1kvn]], [[1kvv]] – AfSRP19 (mutant) – ''Archaeoglobus fulgidus'' – NMR<BR /> |
| + | **[[2jqe]] – AfSRP54 M domain 313-433 – NMR<BR /> | ||
**[[3dlu]], [[3dlv]], [[3dm5]] – SRP19 – ''Pyrococcus furiosus''<br /> | **[[3dlu]], [[3dlv]], [[3dm5]] – SRP19 – ''Pyrococcus furiosus''<br /> | ||
**[[1j8m]] – AaSPR GTPase domain – ''Acicianus ambivalens''<br /> | **[[1j8m]] – AaSPR GTPase domain – ''Acicianus ambivalens''<br /> | ||
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**[[2pxb]], [[2pxd]], [[2pxe]], [[2pxf]], [[2pxk]], [[2pxl]], [[2pxq]], [[2pxq]], [[2pxt]], [[2pxu]], [[2pxv]] - EcSRP54-like C terminal + 4.5SRNA domain IV (mutant)<br /> | **[[2pxb]], [[2pxd]], [[2pxe]], [[2pxf]], [[2pxk]], [[2pxl]], [[2pxq]], [[2pxq]], [[2pxt]], [[2pxu]], [[2pxv]] - EcSRP54-like C terminal + 4.5SRNA domain IV (mutant)<br /> | ||
**[[2j28]] – EcSRP54-like + 70S ribosome – Cryo EM<BR /> | **[[2j28]] – EcSRP54-like + 70S ribosome – Cryo EM<BR /> | ||
| - | **[[4ue4]] – SRP M domain + | + | **[[4ue4]] – SRP M domain + FtsQ signal sequence + RNA - ''Bacillus subtilis''<br /> |
*Other signal recognition particle complexes | *Other signal recognition particle complexes | ||
| - | **[[5l3q]] – hSRP54 + SRP receptor subunit α<br /> | + | **[[5l3q]], [[6y32]] – hSRP54 + SRP receptor subunit α<br /> |
**[[3dep]] - AtSRP43 residues 85-267 + polypeptide<br /> | **[[3dep]] - AtSRP43 residues 85-267 + polypeptide<br /> | ||
**[[5e4w]] - AtSRP43 chromodomain 2-3 + thioredoxin + ALB3 tail<br /> | **[[5e4w]] - AtSRP43 chromodomain 2-3 + thioredoxin + ALB3 tail<br /> | ||
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**[[1jpj]], [[1jpn]], [[2c04]] – TaSRP54-like NG domain + GMPPNP<BR /> | **[[1jpj]], [[1jpn]], [[2c04]] – TaSRP54-like NG domain + GMPPNP<BR /> | ||
**[[1o87]], [[2c03]] - TaSRP54-like NG domain + GDP<br /> | **[[1o87]], [[2c03]] - TaSRP54-like NG domain + GDP<br /> | ||
| - | **[[1okk]], [[1rj9]], [[2cnw]] - TaSRP54-like NG domain + cell division protein | + | **[[1okk]], [[1rj9]], [[2cnw]] - TaSRP54-like NG domain + cell division protein FtsY<br /> |
| - | **[[2j7p]] - TaSRP54-like NG domain + cell division protein | + | **[[2j7p]] - TaSRP54-like NG domain + cell division protein FtsY + GMPPNP<BR /> |
| - | **[[5l3s]] - SsSRP54 + cell division protein | + | **[[5l3s]] - SsSRP54 + cell division protein FtsY<br /> |
**[[3kl4]] – SsSRP54 residues 2-432 + polypeptide<br /> | **[[3kl4]] – SsSRP54 residues 2-432 + polypeptide<br /> | ||
**[[5l3v]] - SsSRP54 + GDP<br /> | **[[5l3v]] - SsSRP54 + GDP<br /> | ||
| - | **[[4c7o]] – EcSRP + | + | **[[4c7o]] – EcSRP + FtsY + SRP RNA<br /> |
}} | }} | ||
Revision as of 11:06, 9 November 2020
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3D structures of signal recognition particle
Updated on 09-November-2020
References
- ↑ Halic M, Beckmann R. The signal recognition particle and its interactions during protein targeting. Curr Opin Struct Biol. 2005 Feb;15(1):116-25. PMID:15718142 doi:http://dx.doi.org/10.1016/j.sbi.2005.01.013
- ↑ Bovia F, Fornallaz M, Leffers H, Strub K. The SRP9/14 subunit of the signal recognition particle (SRP) is present in more than 20-fold excess over SRP in primate cells and exists primarily free but also in complex with small cytoplasmic Alu RNAs. Mol Biol Cell. 1995 Apr;6(4):471-84. PMID:7542942
- ↑ Dean KA, von Ahsen O, Gorlich D, Fried HM. Signal recognition particle protein 19 is imported into the nucleus by importin 8 (RanBP8) and transportin. J Cell Sci. 2001 Oct;114(Pt 19):3479-85. PMID:11682607
- ↑ Gowda K, Black SD, Moeller I, Sakakibara Y, Liu MC, Zwieb C. Protein SRP54 of human signal recognition particle: cloning, expression, and comparative analysis of functional sites. Gene. 1998 Jan 30;207(2):197-207. PMID:9511762
- ↑ Lutcke H, Prehn S, Ashford AJ, Remus M, Frank R, Dobberstein B. Assembly of the 68- and 72-kD proteins of signal recognition particle with 7S RNA. J Cell Biol. 1993 Jun;121(5):977-85. PMID:8388879
