This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1j8b

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 1: Line 1:
==Structure of YbaB from Haemophilus influenzae (HI0442), a protein of unknown function==
==Structure of YbaB from Haemophilus influenzae (HI0442), a protein of unknown function==
-
<StructureSection load='1j8b' size='340' side='right' caption='[[1j8b]], [[Resolution|resolution]] 1.75&Aring;' scene=''>
+
<StructureSection load='1j8b' size='340' side='right'caption='[[1j8b]], [[Resolution|resolution]] 1.75&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[1j8b]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Haein Haein]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1J8B OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1J8B FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[1j8b]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Haein Haein]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1J8B OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=1J8B FirstGlance]. <br>
</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">HI0442 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=71421 HAEIN])</td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">HI0442 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=71421 HAEIN])</td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1j8b FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1j8b OCA], [http://pdbe.org/1j8b PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1j8b RCSB], [http://www.ebi.ac.uk/pdbsum/1j8b PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1j8b ProSAT]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=1j8b FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1j8b OCA], [http://pdbe.org/1j8b PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1j8b RCSB], [http://www.ebi.ac.uk/pdbsum/1j8b PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1j8b ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
Line 14: Line 14:
Check<jmol>
Check<jmol>
<jmolCheckbox>
<jmolCheckbox>
-
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/j8/1j8b_consurf.spt"</scriptWhenChecked>
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/j8/1j8b_consurf.spt"</scriptWhenChecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
Line 23: Line 23:
</StructureSection>
</StructureSection>
[[Category: Haein]]
[[Category: Haein]]
 +
[[Category: Large Structures]]
[[Category: Eisenstein, E]]
[[Category: Eisenstein, E]]
[[Category: Herzberg, O]]
[[Category: Herzberg, O]]

Revision as of 07:28, 25 November 2020

Structure of YbaB from Haemophilus influenzae (HI0442), a protein of unknown function

PDB ID 1j8b

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools