1d7f

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[[Image:1d7f.gif|left|200px]]
[[Image:1d7f.gif|left|200px]]
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{{Structure
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<!--
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|PDB= 1d7f |SIZE=350|CAPTION= <scene name='initialview01'>1d7f</scene>, resolution 1.9&Aring;
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The line below this paragraph, containing "STRUCTURE_1d7f", creates the "Structure Box" on the page.
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|SITE=
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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|LIGAND= <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Cyclomaltodextrin_glucanotransferase Cyclomaltodextrin glucanotransferase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.4.1.19 2.4.1.19] </span>
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or leave the SCENE parameter empty for the default display.
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|GENE=
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|DOMAIN=
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{{STRUCTURE_1d7f| PDB=1d7f | SCENE= }}
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|RELATEDENTRY=[[1pam|1PAM]]
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|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1d7f FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1d7f OCA], [http://www.ebi.ac.uk/pdbsum/1d7f PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1d7f RCSB]</span>
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}}
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'''CRYSTAL STRUCTURE OF ASPARAGINE 233-REPLACED CYCLODEXTRIN GLUCANOTRANSFERASE FROM ALKALOPHILIC BACILLUS SP. 1011 DETERMINED AT 1.9 A RESOLUTION'''
'''CRYSTAL STRUCTURE OF ASPARAGINE 233-REPLACED CYCLODEXTRIN GLUCANOTRANSFERASE FROM ALKALOPHILIC BACILLUS SP. 1011 DETERMINED AT 1.9 A RESOLUTION'''
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[[Category: Ishii, N.]]
[[Category: Ishii, N.]]
[[Category: Yamane, K.]]
[[Category: Yamane, K.]]
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[[Category: cgtase]]
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[[Category: Cgtase]]
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[[Category: cyclodextrin glucanotransferase]]
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[[Category: Cyclodextrin glucanotransferase]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Fri May 2 13:31:47 2008''
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Mar 30 19:36:06 2008''
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Revision as of 10:31, 2 May 2008

Template:STRUCTURE 1d7f

CRYSTAL STRUCTURE OF ASPARAGINE 233-REPLACED CYCLODEXTRIN GLUCANOTRANSFERASE FROM ALKALOPHILIC BACILLUS SP. 1011 DETERMINED AT 1.9 A RESOLUTION


Overview

The crystal structure of asparagine 233-replaced cyclodextrin glucanotransferase from alkalophilic Bacillus sp. 1011 was determined at 1.9 A resolution. While the wild-type CGTase from the same bacterium produces a mixture of mainly alpha-, beta- and gamma-cyclodextrins, catalyzing the conversion of starch into cyclic or linear alpha-1,4-linked glucopyranosyl chains, site-directed mutation of histidine-233 to asparagine changed the nature of the enzyme such that it no longer produced alpha-cyclodextrin. This is a promising step towards an industrial requirement, i.e. unification of the products from the enzyme. Two independent molecules were found in an asymmetric unit, related by pseudo two-fold symmetry. The backbone structure of the mutant enzyme was very similar to that of the wild-type CGTase except that the position of the side chain of residue 233 was such that it is not likely to participate in the catalytic function. The active site cleft was filled with several water molecules, forming a hydrogen bond network with various polar side chains of the enzyme, but not with asparagine-233. The differences in hydrogen bonds in the neighborhood of asparagine-233, maintaining the architecture of the active site cleft, seem to be responsible for the change in molecular recognition of both substrate and product of the mutant CGTase.

About this Structure

1D7F is a Single protein structure of sequence from Bacillus sp.. Full crystallographic information is available from OCA.

Reference

Crystal structure of asparagine 233-replaced cyclodextrin glucanotransferase from alkalophilic Bacillus sp. 1011 determined at 1.9 A resolution., Ishii N, Haga K, Yamane K, Harata K, J Mol Recognit. 2000 Jan-Feb;13(1):35-43. PMID:10679895 Page seeded by OCA on Fri May 2 13:31:47 2008

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