This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


Sandbox Reserved 1633

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 6: Line 6:
Proteopedia Final Assignment
Proteopedia Final Assignment
-
IMAGES:
+
 
 +
***IMAGES***
1c) <scene name='86/861615/A_rotating_image_of_protein/1'>A rotating image of the protein as a cartoon</scene>
1c) <scene name='86/861615/A_rotating_image_of_protein/1'>A rotating image of the protein as a cartoon</scene>
3a) <scene name='86/861615/View_3/2'>Ligand labeling of the atom</scene>. <scene name='86/861615/Ligand_outlined_in_green/1'>Ligand showcased in green</scene>
3a) <scene name='86/861615/View_3/2'>Ligand labeling of the atom</scene>. <scene name='86/861615/Ligand_outlined_in_green/1'>Ligand showcased in green</scene>
Line 16: Line 17:
ii)<scene name='86/861615/Hydrogen_bonding_in_black/1'>Hydrogen bonds in black along the side chains</scene>
ii)<scene name='86/861615/Hydrogen_bonding_in_black/1'>Hydrogen bonds in black along the side chains</scene>
iii) <scene name='86/861615/N_and_c_terminus/1'>N terminus (blue) and C terminus (red) ***with other colors in ROYGBP order***</scene>
iii) <scene name='86/861615/N_and_c_terminus/1'>N terminus (blue) and C terminus (red) ***with other colors in ROYGBP order***</scene>
 +
 +
 +
***PRESENTATION INFORMATION***
 +
 +
= Discussed the function of your protein and utilized images on the page to explain that function=
 +
 +
=Discussed biological relevance and broader implications=
 +
 +
=Discussed important amino acids and utilized images on the page to support the discussion=
 +
 +
=Discussed structural highlights and utilized images on the page to explain those highlights=
 +
 +
=Discussed other important features and utilized images on the page to explain those features=
 +
 +
 +
</StructureSection>
</StructureSection>

Revision as of 00:33, 8 December 2020

This Sandbox is Reserved from 09/18/2020 through 03/20/2021 for use in CHEM 351 Biochemistry taught by Bonnie Hall at Grand View University, Des Moines, IA. This reservation includes Sandbox Reserved 1628 through Sandbox Reserved 1642.
To get started:
  • Click the edit this page tab at the top. Save the page after each step, then edit it again.
  • show the Scene authoring tools, create a molecular scene, and save it. Copy the green link into the page.
  • Add a description of your scene. Use the buttons above the wikitext box for bold, italics, links, headlines, etc.

More help: Help:Editing

Your Heading Here (maybe something like 'Structure')

Caption for this structure

Drag the structure with the mouse to rotate

References

[3]

  1. ↑ Hanson, R. M., Prilusky, J., Renjian, Z., Nakane, T. and Sussman, J. L. (2013), JSmol and the Next-Generation Web-Based Representation of 3D Molecular Structure as Applied to Proteopedia. Isr. J. Chem., 53:207-216. doi:http://dx.doi.org/10.1002/ijch.201300024
  2. ↑ Herraez A. Biomolecules in the computer: Jmol to the rescue. Biochem Mol Biol Educ. 2006 Jul;34(4):255-61. doi: 10.1002/bmb.2006.494034042644. PMID:21638687 doi:10.1002/bmb.2006.494034042644
  3. ↑ 32661196
Retrieved from "http://52.214.119.220/wiki/index.php/Sandbox_Reserved_1633"
Personal tools