This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1spx

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 1: Line 1:
==Crystal Structure of Glucose Dehydrogenase of Caenorhabditis Elegans in the Apo-Form==
==Crystal Structure of Glucose Dehydrogenase of Caenorhabditis Elegans in the Apo-Form==
-
<StructureSection load='1spx' size='340' side='right' caption='[[1spx]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
+
<StructureSection load='1spx' size='340' side='right'caption='[[1spx]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[1spx]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Caeel Caeel]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1SPX OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1SPX FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[1spx]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Caeel Caeel]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1SPX OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=1SPX FirstGlance]. <br>
</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">D1054.8 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=6239 CAEEL])</td></tr>
</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">D1054.8 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=6239 CAEEL])</td></tr>
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Glucose_1-dehydrogenase Glucose 1-dehydrogenase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.1.1.47 1.1.1.47] </span></td></tr>
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Glucose_1-dehydrogenase Glucose 1-dehydrogenase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.1.1.47 1.1.1.47] </span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1spx FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1spx OCA], [http://pdbe.org/1spx PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1spx RCSB], [http://www.ebi.ac.uk/pdbsum/1spx PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1spx ProSAT], [http://www.topsan.org/Proteins/SECSG/1spx TOPSAN]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=1spx FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1spx OCA], [http://pdbe.org/1spx PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1spx RCSB], [http://www.ebi.ac.uk/pdbsum/1spx PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1spx ProSAT], [http://www.topsan.org/Proteins/SECSG/1spx TOPSAN]</span></td></tr>
</table>
</table>
== Evolutionary Conservation ==
== Evolutionary Conservation ==
Line 12: Line 12:
Check<jmol>
Check<jmol>
<jmolCheckbox>
<jmolCheckbox>
-
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/sp/1spx_consurf.spt"</scriptWhenChecked>
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/sp/1spx_consurf.spt"</scriptWhenChecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
Line 22: Line 22:
[[Category: Caeel]]
[[Category: Caeel]]
[[Category: Glucose 1-dehydrogenase]]
[[Category: Glucose 1-dehydrogenase]]
 +
[[Category: Large Structures]]
[[Category: Arabashi, A]]
[[Category: Arabashi, A]]
[[Category: Bray, T]]
[[Category: Bray, T]]

Revision as of 11:31, 24 December 2020

Crystal Structure of Glucose Dehydrogenase of Caenorhabditis Elegans in the Apo-Form

PDB ID 1spx

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools