Ubiquitin
From Proteopedia
(Difference between revisions)
| Line 22: | Line 22: | ||
**[[2ojr]], [[2nr2]], [[2fcq]], [[1ubi]], [[1ubq]], [[1xqq]], [[3ons]], [[4wzp]], [[5k9p]], [[4zqs]], [[5dk8]], [[4xof]], [[4xok]], [[4xol]], [[4zpz]] - hUBB - human<br /> | **[[2ojr]], [[2nr2]], [[2fcq]], [[1ubi]], [[1ubq]], [[1xqq]], [[3ons]], [[4wzp]], [[5k9p]], [[4zqs]], [[5dk8]], [[4xof]], [[4xok]], [[4xol]], [[4zpz]] - hUBB - human<br /> | ||
**[[2zcb]], [[2gbj]], [[2gbk]], [[2gbm]], [[2gbn]], [[2gbr]], [[2fcm]], [[2fcn]], [[2fcs]], [[1yiw]], [[1yj1]], [[1sif]], [[1ogw]], [[4hk2]], [[4hjk]], [[4pij]], [[4pih]], [[4pig]] - hUBB (mutant)<br /> | **[[2zcb]], [[2gbj]], [[2gbk]], [[2gbm]], [[2gbn]], [[2gbr]], [[2fcm]], [[2fcn]], [[2fcs]], [[1yiw]], [[1yj1]], [[1sif]], [[1ogw]], [[4hk2]], [[4hjk]], [[4pij]], [[4pih]], [[4pig]] - hUBB (mutant)<br /> | ||
| - | **[[2kn5]], [[2klg]], [[2jzz]], [[2pe9]], [[2pea]], [[1g6j]], [[1d3z]], [[2kox]], [[2ld9]], [[2k25]], [[5ujl]] – hUBB – NMR<br /> | + | **[[2kn5]], [[2klg]], [[2jzz]], [[2pe9]], [[2pea]], [[1g6j]], [[1d3z]], [[2kox]], [[2ld9]], [[2k25]], [[5ujl]], [[6v5d]] – hUBB – NMR<br /> |
| - | **[[1c3t]], [[1ud7]], [[2mi8]], [[2rsu]], [[2ru6]] - hUBB (mutant) - NMR<br /> | + | **[[1c3t]], [[1ud7]], [[2mi8]], [[2rsu]], [[2ru6]], [[6k4i]] - hUBB (mutant) - NMR<br /> |
**[[2m0x]] - hUBB - engineered – NMR<br /> | **[[2m0x]] - hUBB - engineered – NMR<br /> | ||
**[[6gf1]] - hUBB D<br /> | **[[6gf1]] - hUBB D<br /> | ||
| Line 121: | Line 121: | ||
**[[6byh]], [[6c16]] – hUBB + Skp1 + Fbl11<br /> | **[[6byh]], [[6c16]] – hUBB + Skp1 + Fbl11<br /> | ||
**[[6bva]] – hUBB + Skp1 + Fbl10<br /> | **[[6bva]] – hUBB + Skp1 + Fbl10<br /> | ||
| + | **[[6a6i]] – hUBB + Cockayne syndrome group B protein <br /> | ||
* Polyubiquitin-C | * Polyubiquitin-C | ||
| Line 141: | Line 142: | ||
**[[3ofi]] – hUBB+insulin protease | **[[3ofi]] – hUBB+insulin protease | ||
| - | **[[3i3t]], [[2ibi]], [[2ayo]], [[1nbf]], [[2wdt]], [[4i6l]], [[4i6n]], [[4ig7]], [[5l8h]], [[5jtj]], [[5cvm]], [[6crn]], [[6ml1]] - hUBB+ | + | **[[3i3t]], [[2ibi]], [[2ayo]], [[1nbf]], [[2wdt]], [[4i6l]], [[4i6n]], [[4ig7]], [[5l8h]], [[5jtj]], [[5cvm]], [[6crn]], [[6ml1]] - hUBB+ USP catalytic domain<br /> |
**[[3n3k]], [[3ifw]], [[3kvf]], [[3kw5]], [[3irt]], [[3mtn]], [[3ihp]], [[3v6c]], [[3v6e]]– hUBB (mutant)+hUBB carboxyl-terminal esterase catalytic domain<br /> | **[[3n3k]], [[3ifw]], [[3kvf]], [[3kw5]], [[3irt]], [[3mtn]], [[3ihp]], [[3v6c]], [[3v6e]]– hUBB (mutant)+hUBB carboxyl-terminal esterase catalytic domain<br /> | ||
| - | **[[5l8w]], [[5cvn]], [[5cvo]] – hUBB + USP12 + WD repeat containing protein 48<br /> | ||
**[[6cpm]] – hUBB (mutant) + USP15<br /> | **[[6cpm]] – hUBB (mutant) + USP15<br /> | ||
**[[2khw]] – hUBB+immunoglobulin G-binding protein G<br /> | **[[2khw]] – hUBB+immunoglobulin G-binding protein G<br /> | ||
| Line 170: | Line 170: | ||
**[[4zfr]], [[4zft]] – hUBB + SST2<br /> | **[[4zfr]], [[4zft]] – hUBB + SST2<br /> | ||
**[[2j7q]] – hUBB + McmV tegument protein<br /> | **[[2j7q]] – hUBB + McmV tegument protein<br /> | ||
| - | **[[4dhj]], [[4dhz]] – hUBB (mutant) + UBB thiolesterase + UBB aldehyde <br /> | ||
**[[3rul]] – hUBB + dalvancin<br /> | **[[3rul]] – hUBB + dalvancin<br /> | ||
**[[3vfk]] – hUBB + monodechloro-teicoplanin <br /> | **[[3vfk]] – hUBB + monodechloro-teicoplanin <br /> | ||
| Line 180: | Line 179: | ||
**[[4jio]] – hUBB + yBRO1<br /> | **[[4jio]] – hUBB + yBRO1<br /> | ||
**[[5af6]] – hUBB + TRABID<br /> | **[[5af6]] – hUBB + TRABID<br /> | ||
| - | **[[6q01]] – hUBB + TDP2<br /> | + | **[[6q01]], [[6q00]] – hUBB + TDP2<br /> |
**[[6asr]] – hUBB + REV1<br /> | **[[6asr]] – hUBB + REV1<br /> | ||
**[[5vzm]] – hUBB + REV1 - NMR<br /> | **[[5vzm]] – hUBB + REV1 - NMR<br /> | ||
**[[5zq5]] – hUBB + SidE<br /> | **[[5zq5]] – hUBB + SidE<br /> | ||
| - | **[[5zq4]], [[5zq6]], [[5zq7]] – hUBB + SidE + nucleotide<br /> | ||
**[[6oam]] – hUBB + Dub2<br /> | **[[6oam]] – hUBB + Dub2<br /> | ||
**[[5yij]] – hUBB + SdeA<br /> | **[[5yij]] – hUBB + SdeA<br /> | ||
| Line 193: | Line 191: | ||
**[[5yt6]] – hUBB + Tax1 binding protein<br /> | **[[5yt6]] – hUBB + Tax1 binding protein<br /> | ||
**[[6q01]] – hUBB + RPN10<br /> | **[[6q01]] – hUBB + RPN10<br /> | ||
| - | **[[5v1z]], [[5v1y]], [[6oi4]] – hUBB + RPN13 + RPN2<br /> | ||
**[[5jp3]] – hUBB + xanthomonas outer protein<br /> | **[[5jp3]] – hUBB + xanthomonas outer protein<br /> | ||
**[[5lrw]] – hUBB (mutant)+ OUT domain containing protein 7B<br /> | **[[5lrw]] – hUBB (mutant)+ OUT domain containing protein 7B<br /> | ||
| Line 225: | Line 222: | ||
**[[1otr]] – yUBB+CUE2<br /> | **[[1otr]] – yUBB+CUE2<br /> | ||
**[[2l00]] – yUBB + Zfand5<br /> | **[[2l00]] – yUBB + Zfand5<br /> | ||
| + | |||
| + | * Ubiquitin binary complex with protein | ||
| + | |||
| + | **[[5l8w]], [[5cvn]], [[5cvo]] – hUBB + USP12 + WD repeat containing protein 48<br /> | ||
| + | **[[4dhj]], [[4dhz]] – hUBB (mutant) + UBB thiolesterase + UBB aldehyde <br /> | ||
| + | **[[5zq4]], [[5zq6]], [[5zq7]] – hUBB + SidE + nucleotide<br /> | ||
| + | **[[5v1z]], [[5v1y]], [[6oi4]] – hUBB + RPN13 + RPN2<br /> | ||
| + | **[[6eqi]] – hUBB + Nb696 + PINK1<br /> | ||
**[[6oaa]], [[6oa9]] – yUBB + Npl4 + cdc48 - Cryo EM<br /> | **[[6oaa]], [[6oa9]] – yUBB + Npl4 + cdc48 - Cryo EM<br /> | ||
| + | **[[5wvo]] – hUBB + Npl4 + cdc48 - Cryo EM<br /> | ||
* Ubiquitin complex with ubiquitination enzymes | * Ubiquitin complex with ubiquitination enzymes | ||
Revision as of 07:02, 3 January 2021
| |||||||||||
3D Structures of Ubiquitin
Updated on 03-January-2021
References
- ↑ Hershko A, Ciechanover A. The ubiquitin system. Annu Rev Biochem. 1998;67:425-79. PMID:9759494 doi:http://dx.doi.org/10.1146/annurev.biochem.67.1.425
- ↑ Paul S. Dysfunction of the ubiquitin-proteasome system in multiple disease conditions: therapeutic approaches. Bioessays. 2008 Nov;30(11-12):1172-84. doi: 10.1002/bies.20852. PMID:18937370 doi:http://dx.doi.org/10.1002/bies.20852
Proteopedia Page Contributors and Editors (what is this?)
Michal Harel, Alexander Berchansky, Joel L. Sussman, David Canner, Jaime Prilusky
