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2de4
From Proteopedia
(Difference between revisions)
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==Crystal structure of DSZB C27S mutant in complex with biphenyl-2-sulfinic acid== | ==Crystal structure of DSZB C27S mutant in complex with biphenyl-2-sulfinic acid== | ||
| - | <StructureSection load='2de4' size='340' side='right' caption='[[2de4]], [[Resolution|resolution]] 1.80Å' scene=''> | + | <StructureSection load='2de4' size='340' side='right'caption='[[2de4]], [[Resolution|resolution]] 1.80Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[2de4]] is a 2 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[2de4]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Rhosg Rhosg]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2DE4 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2DE4 FirstGlance]. <br> |
| - | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=BPS:1,1-BIPHENYL-2-SULFINIC+ACID'>BPS</scene></td></tr> | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=BPS:1,1-BIPHENYL-2-SULFINIC+ACID'>BPS</scene></td></tr> |
| - | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[2de2|2de2]], [[2de3|2de3]]</td></tr> | + | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[2de2|2de2]], [[2de3|2de3]]</div></td></tr> |
| - | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">DSZB ([ | + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">DSZB ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=54064 RHOSG])</td></tr> |
| - | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/2'-hydroxybiphenyl-2-sulfinate_desulfinase 2'-hydroxybiphenyl-2-sulfinate desulfinase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.13.1.3 3.13.1.3] </span></td></tr> |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2de4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2de4 OCA], [https://pdbe.org/2de4 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2de4 RCSB], [https://www.ebi.ac.uk/pdbsum/2de4 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2de4 ProSAT]</span></td></tr> |
</table> | </table> | ||
== Function == | == Function == | ||
| - | [[ | + | [[https://www.uniprot.org/uniprot/SOXB_RHOSG SOXB_RHOSG]] Part of a pathway to remove covalently bound sulfur from dibenzothiophene (DBT) without breaking carbon-carbon bonds. This enzyme metabolizes DBT-sulfone (DBTO2 or DBT 5,5-dioxide) to 2-hydroxybiphenyl (2-HBP). |
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
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</StructureSection> | </StructureSection> | ||
[[Category: 2'-hydroxybiphenyl-2-sulfinate desulfinase]] | [[Category: 2'-hydroxybiphenyl-2-sulfinate desulfinase]] | ||
| + | [[Category: Large Structures]] | ||
[[Category: Rhosg]] | [[Category: Rhosg]] | ||
[[Category: Izumi, Y]] | [[Category: Izumi, Y]] | ||
Revision as of 12:00, 3 February 2021
Crystal structure of DSZB C27S mutant in complex with biphenyl-2-sulfinic acid
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