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2eh3
From Proteopedia
(Difference between revisions)
(New page: 200px<br /><applet load="2eh3" size="350" color="white" frame="true" align="right" spinBox="true" caption="2eh3, resolution 1.55Å" /> '''Crystal structure of...) |
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| - | [[Image:2eh3.jpg|left|200px]]<br /><applet load="2eh3" size="350" color="white" frame="true" align="right" spinBox="true" | ||
| - | caption="2eh3, resolution 1.55Å" /> | ||
| - | '''Crystal structure of aq_1058, a transcriptional regulator (TerR/AcrR family) from Aquifex aeolicus VF5'''<br /> | ||
| - | == | + | ==Crystal structure of aq_1058, a transcriptional regulator (TerR/AcrR family) from Aquifex aeolicus VF5== |
| - | + | <StructureSection load='2eh3' size='340' side='right'caption='[[2eh3]], [[Resolution|resolution]] 1.55Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | [[ | + | <table><tr><td colspan='2'>[[2eh3]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Aquae Aquae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2EH3 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2EH3 FirstGlance]. <br> |
| - | [[ | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr> |
| - | [[ | + | <tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> |
| - | + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">acrR1 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=224324 AQUAE])</td></tr> | |
| - | [ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2eh3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2eh3 OCA], [https://pdbe.org/2eh3 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2eh3 RCSB], [https://www.ebi.ac.uk/pdbsum/2eh3 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2eh3 ProSAT], [https://www.topsan.org/Proteins/RSGI/2eh3 TOPSAN]</span></td></tr> |
| - | [ | + | </table> |
| - | [ | + | == Evolutionary Conservation == |
| - | + | [[Image:Consurf_key_small.gif|200px|right]] | |
| - | [ | + | Check<jmol> |
| - | [ | + | <jmolCheckbox> |
| - | [ | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/eh/2eh3_consurf.spt"</scriptWhenChecked> |
| - | [[ | + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> |
| - | + | <text>to colour the structure by Evolutionary Conservation</text> | |
| - | + | </jmolCheckbox> | |
| - | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2eh3 ConSurf]. | |
| - | [ | + | <div style="clear:both"></div> |
| - | [[ | + | |
| - | [ | + | |
| - | + | ||
| - | + | ==See Also== | |
| + | *[[Tetracycline repressor protein 3D structures|Tetracycline repressor protein 3D structures]] | ||
| + | *[[Transcriptional activator 3D structures|Transcriptional activator 3D structures]] | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
| + | [[Category: Aquae]] | ||
| + | [[Category: Large Structures]] | ||
| + | [[Category: Agari, Y]] | ||
| + | [[Category: Kuramitsu, S]] | ||
| + | [[Category: Structural genomic]] | ||
| + | [[Category: Shinkai, A]] | ||
| + | [[Category: Yokoyama, S]] | ||
| + | [[Category: All alpha protein]] | ||
| + | [[Category: C-terminal domain]] | ||
| + | [[Category: Dna/rna-binding 3-helical bundle]] | ||
| + | [[Category: Helix-turn-helix]] | ||
| + | [[Category: Homeodomain-like]] | ||
| + | [[Category: National project on protein structural and functional analyse]] | ||
| + | [[Category: Nppsfa]] | ||
| + | [[Category: Rsgi]] | ||
| + | [[Category: Tetracyclin repressor-like]] | ||
| + | [[Category: Transcription]] | ||
Current revision
Crystal structure of aq_1058, a transcriptional regulator (TerR/AcrR family) from Aquifex aeolicus VF5
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Categories: Aquae | Large Structures | Agari, Y | Kuramitsu, S | Structural genomic | Shinkai, A | Yokoyama, S | All alpha protein | C-terminal domain | Dna/rna-binding 3-helical bundle | Helix-turn-helix | Homeodomain-like | National project on protein structural and functional analyse | Nppsfa | Rsgi | Tetracyclin repressor-like | Transcription
