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2ek1
From Proteopedia
(Difference between revisions)
(New page: 200px {{Structure |PDB= 2ek1 |SIZE=350|CAPTION= <scene name='initialview01'>2ek1</scene>, resolution 2.00Å |SITE= |LIGAND= <scene name='pdbligand=MSE:SELEN...) |
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| - | [[Image:2ek1.jpg|left|200px]] | ||
| - | + | ==Crystal structure of RNA-binding motif of human rna-binding protein 12== | |
| - | + | <StructureSection load='2ek1' size='340' side='right'caption='[[2ek1]], [[Resolution|resolution]] 2.00Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | | | + | <table><tr><td colspan='2'>[[2ek1]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Human Human]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2EK1 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2EK1 FirstGlance]. <br> |
| - | + | </td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> | |
| - | | | + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">RBM12, KIAA0765 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN])</td></tr> |
| - | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ek1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ek1 OCA], [https://pdbe.org/2ek1 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ek1 RCSB], [https://www.ebi.ac.uk/pdbsum/2ek1 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ek1 ProSAT], [https://www.topsan.org/Proteins/RSGI/2ek1 TOPSAN]</span></td></tr> | |
| - | + | </table> | |
| - | + | == Evolutionary Conservation == | |
| - | + | [[Image:Consurf_key_small.gif|200px|right]] | |
| - | + | Check<jmol> | |
| - | + | <jmolCheckbox> | |
| - | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ek/2ek1_consurf.spt"</scriptWhenChecked> | |
| - | + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | |
| - | == | + | <text>to colour the structure by Evolutionary Conservation</text> |
| - | + | </jmolCheckbox> | |
| - | [[Category: | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2ek1 ConSurf]. |
| - | [[Category: | + | <div style="clear:both"></div> |
| - | [[Category: Bessho, Y | + | __TOC__ |
| + | </StructureSection> | ||
| + | [[Category: Human]] | ||
| + | [[Category: Large Structures]] | ||
| + | [[Category: Bessho, Y]] | ||
[[Category: Ihsanawati]] | [[Category: Ihsanawati]] | ||
| - | [[Category: | + | [[Category: Structural genomic]] |
| - | [[Category: Shirouzu, M | + | [[Category: Shirouzu, M]] |
| - | [[Category: Yokoyama, S | + | [[Category: Yokoyama, S]] |
| - | [[Category: | + | [[Category: Dimer]] |
| - | [[Category: | + | [[Category: National project on protein structural and functional analyse]] |
| - | [[Category: | + | [[Category: Nppsfa]] |
| - | [[Category: | + | [[Category: Rna binding protein]] |
| - | + | [[Category: Rna recognition motif]] | |
| - | [[Category: | + | [[Category: Rsgi]] |
| - | [[Category: | + | |
| - | + | ||
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Current revision
Crystal structure of RNA-binding motif of human rna-binding protein 12
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