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2ewo
From Proteopedia
(Difference between revisions)
(New page: 200px<br /><applet load="2ewo" size="450" color="white" frame="true" align="right" spinBox="true" caption="2ewo, resolution 2.90Å" /> '''X-ray structure of p...) |
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| - | [[Image:2ewo.gif|left|200px]]<br /><applet load="2ewo" size="450" color="white" frame="true" align="right" spinBox="true" | ||
| - | caption="2ewo, resolution 2.90Å" /> | ||
| - | '''X-ray structure of putative agmatine deiminase Q8DW17, Northeast Structural Genomics target SmR6.'''<br /> | ||
| - | == | + | ==X-ray structure of putative agmatine deiminase Q8DW17, Northeast Structural Genomics target SmR6.== |
| - | + | <StructureSection load='2ewo' size='340' side='right'caption='[[2ewo]], [[Resolution|resolution]] 2.90Å' scene=''> | |
| + | == Structural highlights == | ||
| + | <table><tr><td colspan='2'>[[2ewo]] is a 12 chain structure with sequence from [https://en.wikipedia.org/wiki/Atcc_25175 Atcc 25175]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2EWO OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2EWO FirstGlance]. <br> | ||
| + | </td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> | ||
| + | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[1vkp|1vkp]], [[1xkn|1xkn]], [[1zbr|1zbr]], [[1x72|1x72]]</div></td></tr> | ||
| + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">aguA ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1309 ATCC 25175])</td></tr> | ||
| + | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Agmatine_deiminase Agmatine deiminase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.5.3.12 3.5.3.12] </span></td></tr> | ||
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ewo FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ewo OCA], [https://pdbe.org/2ewo PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ewo RCSB], [https://www.ebi.ac.uk/pdbsum/2ewo PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ewo ProSAT], [https://www.topsan.org/Proteins/NESGC/2ewo TOPSAN]</span></td></tr> | ||
| + | </table> | ||
| + | == Evolutionary Conservation == | ||
| + | [[Image:Consurf_key_small.gif|200px|right]] | ||
| + | Check<jmol> | ||
| + | <jmolCheckbox> | ||
| + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ew/2ewo_consurf.spt"</scriptWhenChecked> | ||
| + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2ewo ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
[[Category: Agmatine deiminase]] | [[Category: Agmatine deiminase]] | ||
| - | [[Category: | + | [[Category: Atcc 25175]] |
| - | [[Category: | + | [[Category: Large Structures]] |
| - | [[Category: Kuzin, A | + | [[Category: Kuzin, A P]] |
| - | [[Category: | + | [[Category: Structural genomic]] |
| - | [[Category: Tong, L | + | [[Category: Tong, L]] |
| - | [[Category: | + | [[Category: Hydrolase]] |
| - | [[Category: | + | [[Category: Nesg]] |
| - | [[Category: | + | [[Category: PSI, Protein structure initiative]] |
| - | [[Category: | + | [[Category: Q8dw17]] |
| - | [[Category: | + | [[Category: Smr6]] |
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Current revision
X-ray structure of putative agmatine deiminase Q8DW17, Northeast Structural Genomics target SmR6.
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