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2ffg
From Proteopedia
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| - | [[Image:2ffg.gif|left|200px]] | ||
| - | + | ==Novel x-ray structure of the YkuJ protein from Bacillus subtilis. Northeast Structural Genomics target SR360.== | |
| - | + | <StructureSection load='2ffg' size='340' side='right'caption='[[2ffg]], [[Resolution|resolution]] 2.31Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | + | <table><tr><td colspan='2'>[[2ffg]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/"vibrio_subtilis"_ehrenberg_1835 "vibrio subtilis" ehrenberg 1835]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2FFG OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2FFG FirstGlance]. <br> | |
| - | + | </td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> | |
| - | + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">ykuJ ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1423 "Vibrio subtilis" Ehrenberg 1835])</td></tr> | |
| - | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ffg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ffg OCA], [https://pdbe.org/2ffg PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ffg RCSB], [https://www.ebi.ac.uk/pdbsum/2ffg PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ffg ProSAT], [https://www.topsan.org/Proteins/NESGC/2ffg TOPSAN]</span></td></tr> | |
| - | + | </table> | |
| - | + | == Evolutionary Conservation == | |
| - | + | [[Image:Consurf_key_small.gif|200px|right]] | |
| - | + | Check<jmol> | |
| - | == | + | <jmolCheckbox> |
| - | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ff/2ffg_consurf.spt"</scriptWhenChecked> | |
| - | [[ | + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> |
| - | [[ | + | <text>to colour the structure by Evolutionary Conservation</text> |
| - | + | </jmolCheckbox> | |
| - | [[ | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2ffg ConSurf]. |
| - | [[ | + | <div style="clear:both"></div> |
| - | [[ | + | __TOC__ |
| - | [ | + | </StructureSection> |
| - | [[Category: | + | [[Category: Vibrio subtilis ehrenberg 1835]] |
| - | [[Category: | + | [[Category: Large Structures]] |
| - | [[Category: | + | [[Category: Abashidze, M]] |
| - | [[Category: | + | [[Category: Acton, T B]] |
| - | [[Category: | + | [[Category: Conover, K]] |
| - | [[Category: | + | [[Category: Cunningham, K]] |
| - | [[Category: | + | [[Category: Forouhar, F]] |
| - | [[Category: | + | [[Category: Ho, C K]] |
| - | [[Category: | + | [[Category: Hunt, J F]] |
| - | [[Category: | + | [[Category: Janjua, H]] |
| - | [[Category: | + | [[Category: Kuzin, A P]] |
| - | [[Category: | + | [[Category: Ma, L C]] |
| - | [[Category: | + | [[Category: Montelione, G T]] |
[[Category: Structural genomic]] | [[Category: Structural genomic]] | ||
| + | [[Category: Tong, L]] | ||
| + | [[Category: Vorobiev, S M]] | ||
| + | [[Category: Xiao, R]] | ||
| + | [[Category: PSI, Protein structure initiative]] | ||
| + | [[Category: Unknown function]] | ||
[[Category: X-ray sr360 nesg ykuj]] | [[Category: X-ray sr360 nesg ykuj]] | ||
| - | ''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun May 4 03:49:51 2008'' | ||
Current revision
Novel x-ray structure of the YkuJ protein from Bacillus subtilis. Northeast Structural Genomics target SR360.
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Categories: Vibrio subtilis ehrenberg 1835 | Large Structures | Abashidze, M | Acton, T B | Conover, K | Cunningham, K | Forouhar, F | Ho, C K | Hunt, J F | Janjua, H | Kuzin, A P | Ma, L C | Montelione, G T | Structural genomic | Tong, L | Vorobiev, S M | Xiao, R | PSI, Protein structure initiative | Unknown function | X-ray sr360 nesg ykuj
