This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2fs2

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (15:32, 3 March 2021) (edit) (undo)
 
(8 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:2fs2.png|left|200px]]
 
-
<!--
+
==Structure of the E. coli PaaI protein from the phyenylacetic acid degradation operon==
-
The line below this paragraph, containing "STRUCTURE_2fs2", creates the "Structure Box" on the page.
+
<StructureSection load='2fs2' size='340' side='right'caption='[[2fs2]]' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2FS2 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2FS2 FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2fs2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2fs2 OCA], [https://pdbe.org/2fs2 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2fs2 RCSB], [https://www.ebi.ac.uk/pdbsum/2fs2 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2fs2 ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/2fs2 TOPSAN]</span></td></tr>
-
-->
+
</table>
-
{{STRUCTURE_2fs2| PDB=2fs2 | SCENE= }}
+
== Evolutionary Conservation ==
-
 
+
[[Image:Consurf_key_small.gif|200px|right]]
-
===Structure of the E. coli PaaI protein from the phyenylacetic acid degradation operon===
+
Check<jmol>
-
 
+
<jmolCheckbox>
-
 
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/fs/2fs2_consurf.spt"</scriptWhenChecked>
-
<!--
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
The line below this paragraph, {{ABSTRACT_PUBMED_16464851}}, adds the Publication Abstract to the page
+
<text>to colour the structure by Evolutionary Conservation</text>
-
(as it appears on PubMed at http://www.pubmed.gov), where 16464851 is the PubMed ID number.
+
</jmolCheckbox>
-
-->
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2fs2 ConSurf].
-
{{ABSTRACT_PUBMED_16464851}}
+
<div style="clear:both"></div>
-
 
+
__TOC__
-
==About this Structure==
+
</StructureSection>
-
2FS2 is a 2 chains structure of sequences from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2FS2 OCA].
+
[[Category: Large Structures]]
-
 
+
[[Category: Buglino JA]]
-
==Reference==
+
[[Category: Burley SK]]
-
<ref group="xtra">PMID:16464851</ref><references group="xtra"/>
+
[[Category: Kniewel R]]
-
[[Category: Escherichia coli]]
+
[[Category: Lima CD]]
-
[[Category: Buglino, J A.]]
+
[[Category: Solorzano V]]
-
[[Category: Burley, S K.]]
+
[[Category: Wu J]]
-
[[Category: Kniewel, R.]]
+
-
[[Category: Lima, C D.]]
+
-
[[Category: NYSGXRC, New York Structural GenomiX Research Consortium.]]
+
-
[[Category: Solorzano, V.]]
+
-
[[Category: Wu, J.]]
+
-
[[Category: Degradation]]
+
-
[[Category: New york structural genomix research consortium]]
+
-
[[Category: Nysgxrc]]
+
-
[[Category: Operon]]
+
-
[[Category: Phenylacetic acid]]
+
-
[[Category: Protein structure initiative]]
+
-
[[Category: Psi]]
+
-
[[Category: Structural genomic]]
+
-
[[Category: T820]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Feb 16 15:32:13 2009''
+

Current revision

Structure of the E. coli PaaI protein from the phyenylacetic acid degradation operon

PDB ID 2fs2

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools